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This happens on the latest version of numpy (1.25.2), I guess something changed about the `percentile` function that numdifftools is using. It works fine on numpy 1.24.4.
```python
>>> import numpy …
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```
These algorithms operate on dissimilarity matrices as long as they are
Euclidean. The centroid, ward, and median linkage functions should be
modified to support this feature.
Damian
```
Original…
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Median/quantile/bottoms*/tops* fully sort the data prior to returning the results, which is `O(n log n)`. However, all those could be `O(n)` by using a [selection algorithm](https://en.wikipedia.org/w…
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Hi, I'd like to start out by saying how much I appreciate this project. It's great to be able to build Max externals in rust.
I spent a while figuring out how to implement the `assist` and `inletin…
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Hello,
I finally got through the scripts to the point where I am trying to tweak my Log2FC heat.tree
I get a tree with no issues if I use the following script
set.seed(1)
obj6 %>%
heat_tree(…
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The simple medians (e.g. the marginal median) are easy to verify.
But for more complicated median functions, it would be good to verify the results against an R package as part of the test suite.
…
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Using (require math), we can compute (median < data), where data is a list of numbers.
When data length is even, then normally the median is computed by averaging the two central elements, after orde…
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For our use cases, it would be helpful if rolling window objects have more functionality.
Basically, this would mean adding support for median, variance, standard deviation, quantile, and aggregate…
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GSL's moving-window median: https://www.gnu.org/software/gsl/doc/html/movstat.html#moving-median may be faster than the scipy one. I *expect* (but can't confirm) that it would do something smart like …
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I ran diyabc rf for windows to test five scenarios of demographical changes assuming a single population.
So, I used the following priors:
N1 N UN[10,100000,0,0]
N2 N UN[10,100000,0,0]
N3 N UN[1…