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From CHORDS-QA created by [emilybacon](https://github.com/emilybacon): UCCC/CHORDS-QA#88
Add DX_CODETYPE field from the DIAGNOSES table to P1 report, Table 2: Missingness Variables across P1 Tables…
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1. Add ENCTYPE to MISSINGNESS Table 2
2.
| POS = 02 |
-- | -- | --
CPTMOD = GT or 95 | Y | N
Y | 100,000 | 10,000
N | 15,000 | 500,000
| POS = 02 |
-- | -- | --
ENCTYPE = T…
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Since moving to a data versioning scheme, there is no longer any way to remove a row from COVIDcast without removing all previous versions of that row as well (so that it's as if it was never publishe…
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I keep getting a warning message when running extract_f2 via the command line or using run shiny tools
I am using a eigenstrat file which was converted from a vcf using convertVCFtoEigenstrat.sh
war…
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Not sure which one of the recent commits changed this behavior:
``` r
library(survival)
# model
mod # Fixed Effects
#>
#> Parameter | Coefficient | SE | 95% CI | Chi2 | p…
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From CHORDS-QA created by [zuckerr](https://github.com/zuckerr): UCCC/CHORDS-QA#83
1. Add ENCTYPE to MISSINGNESS Table 2
2.
| POS = 02 |
-- | -- | --
CPTMOD = GT or 95 | Y | N
Y | 1…
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Hi,
I was wondering about the use of `simulate_hierarchicell()` in 04_compute_error.R script, the simulated data appears to be filtered to only include genes with a mean value above 1:
```
gene…
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As per #9854, I think it would be good if our scalers and similar worked despite missing values. Without this, we are encouraging users to apply naive imputation or to reimplement preprocessing, where…