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Currently, HTSinfer with `--records` set to 0 (default) runs for hours per sample.
Run test script with `--records` set to 200k, 500k, 1 million, 0 (all records).
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When using the method `plotEXP` to draw a heat map with the correlation of each exposure to the principal components, is it possible to specify which type of correlation we are using, for example, Pea…
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Hello @Xiaojieqiu,
I am try to process my scSLAM-seq data with Dynamo.
Ultimately I would like to generate a plot with vector filed arrows while the cells are distributed based on their c…
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I feel like using the Kruskal test would be more reliable as opposed to choosing an arbitrary number of bins for discretization.
https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.kru…
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Greetings,
My data constructed by some parts which have different sample size from 2000 to 10000+, node num is 50+. My objective is to individually construct networks for these segments and then comp…
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Following [the Zulip conversation](https://clojurians.zulipchat.com/#narrow/stream/236259-tech.2Eml.2Edataset.2Edev/topic/tc.20columns.20and.20dtype-next) that follows @ezmiller's work on the tableclo…
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Hi,
Thanks alot to developers of such a great tool for TE analysis. I have run TEcount on multiple samples and got the output files out.cntTable.
As the output file also has count data for both ge…
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Hello there,
I am trying to replicate the "Cross-correlating data sets" in "Association Analysis". The issue with my data is that instead of a continuous lipids matrix, I have a dichotomous adjacen…
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We should evaluate the importance of features present right now in deeprankcore. Captum may be useful for this, see its [getting started](https://captum.ai/tutorials/Titanic_Basic_Interpret). An alter…
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I didn't find any documentation on the data in the VitalDB dataset within PulseDB. A few clarification questions:
- What does `ABP_Lag` mean and do we need to account for it when analyzing the data…