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1009 Books were updated
IBD removed due to existance of more specific annotation
PTHR28196 Removing annotation to IBD for annotation id 313868080 to term GO:0007000 for node PTN002000197 since the…
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Hi, when I run this command 'python DBSCAN-SWA-master/bin/dbscan-swa.py --h' and then:
File "/home/lfb/Public/Lfb/pha/DBSCAN-SWA-master/bin/dbscan-swa.py", line 2761
global diamond_thread_num
…
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Hi,
Recently I have installing cat, I think I had installed everthing except little bit wrong with Augustus (I got it from bioconda, version 3.3.2, but I think it cannot config as you said). When I…
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GO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway should be
is_a cAMP mediated signalling?
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cotranslational protein targeting to membrane
http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0006613#term=ancchart
ends up as "membrane organization" via
GO:0072657 protein localization to membrane
Howeve…
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We discussed this at the F2F workshop but I don't see any issue created.
I don't have the meeting notes handy, but the general idea was to have biological material entities divided into disjoint ch…
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library(fishHook)
library(gTrack)
library(rtracklayer)
mutations = dt2gr(fread('test_150_maftools.maf'))
genes = gr.sub(import('gencode.v27.annotation.gtf'))
genes = genes %Q% (gene_ty…
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It's confusing having a mix of gene IDs and protein IDs where there is no intended semantic difference.
Consider:
- mapping to HGNC for human
- mapping to NCBI for non-model (e.g. pufferfish)…