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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Bug summary
In the _get_next_subject() method of the Queue class, there is a tr / except statement which…
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could you please tell me how to generate the landmarks to txt files?
For example, in `ADNI_002_S_0816_MR_MPR__GradWarp__B1_Correction__N3__Scaled_Br_20070217005829488_S18402_I40731.txt, `how to expla…
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In my experience initializing a transform for registration is the main component that fails. However, given a labelfield/mask in the target/source I believe the initialization is more robust. Given th…
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Hello @mlavik1,
I have encountered very particular issue. When dataset comes from CT machine, i guess it can be scanned two ways. The patient is either scanned from head to feet, or from feet to head…
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Hello,
I have been using lungmask to segment CT images as a part of a radiogenomics project through my organization. We have a big data set with 130 patients where each patient has 256 DICOM images…
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Look into adding better support for python autocomplete hints. The following SWIG issue contains some related information:
https://github.com/swig/swig/issues/735
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Hi, my name is David, I would like to thank you for taking the time to share your knowledge, it was really helpful for understanding such a complex topic.
A question, at the moment I try to run prepa…
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Hi,
Unable to understand the issue here.
My image and mask files are of same shape = (1, 434, 636).
But nnUNetv2 is showing different shapes.
"
$nnUNetv2_plan_and_preprocess -d 150 --verify…
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reproduce as follows:
```
mamba create -n devbio-napari-crash python=3.9 devbio-napari napari-aicsimageio
mamba activate devbio-napari-crash
napari
```
after some time, you are returned to the c…
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I encounter an error when running groupwise registration after compiling SimpleITK with `SimpleITK_USE_ELASTIX` enabled, as pointed out to me [here](https://github.com/sanderslab/magellanmapper/issues…