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Hi,
I would like to use a PoissonBayesMixedGLM as you guys have implemented, but would like to add an 'extra' offset to the formula. My current formula looks like this:
```
vcf = {"dataset": "0 + C…
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Hi,
In your NM paper, you mentioned that your work 'reveals a set of high-confidence de novo SVs confirmed by multiple technologies'. However, I could not find your released SV set. In your data rep…
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Combined ES + GS data/ short and longreads in a single project
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# "VCard File Photo URI Support | Apple Developer Forums"
I love how Apple products will open up a VCF File in the Contacts App and import nearly all of the information successfully.
However at the…
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Dear @leipzig and developers,
I am testing TileDB-VCF on a SNP dataset derived from a SNP array. It is a combined VCF that spans 2,740 genotyped individuals and ~4,600 SNPs of a non-model species. …
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This is related a bit with #520 (which I'm still looking forward to be approve by the maintainers), but it could still be done in the current API status. My idea is that while importing HTSJDK for a p…
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Hi
I am trying to use SNPhylo, but I am having issues with the format of my VCF-file and the way the software is sorting the columns. I am getting a Warning that all SNP positions do not have DP info…
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Hi Daniel,
Thank you so much for making this package! I have run into an unexpected result after generating a HAD file with remove_double_hets=FALSE (I have not tested it with = TRUE yet). 1) I am no…
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_I'm not sure if it's correct in "server" component - but it does not only affect calendar or contacts, so it's either both - or "server", thus I report it here. Feel free to point me to re-insert it …
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I was running the filter_rad() on a new dataset and got the following error
Filter genotyping threshold: 0.2
Number of individuals / strata / chrom / locus / SNP:
Before: 658 / 3 / 1 / 5478 /…