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```
$ codon run
setop updated
4 months ago
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The filename is unclear but ``Doc/doc.rst`` and ``Doc/doc.tex`` are from @zruan for the codon alignment module. I assume one is generated from the other?
Perhaps this should be turned into a Tutori…
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Hello,
I was applying your pipeline to some sc-data from the allen brain atlas and i got a handful of negative values for the 3'UTR length in my sce object. I was using the utrome_mm10_v2. One exam…
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test code
```
import time
def test_f_string_format_performance(num_entries: int) -> float:
start_time = time.time()
for i in range(num_entries):
formatted_string = f"Number {i}…
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nixpkgsのxeus-clingは壊れている。(nixos/nixpkgs#306782)
これはclingのllvmが適切でないため。
提示されている修正方法はllvm全体に作用する方法である。
そもそもclingで使用されているllvmは独自にパッチが適用されてものである。
[codon](https://github.com/NixOS/nixpkgs/blob/7bc08d019553…
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Hi! Thank you for the great tool!
On a genome that has a coding gene overlapping circular sequence origin, Bakta terminates with error.
I run Bakta version 1.9.4 installed with conda, database v…
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Hi all,
In my database some of the genomes use CTG as their start codon. This appears to not be a valid start codon in PhamDB. Is there any way I can edit the parameters of acceptable start codons …
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Both Codon and [Triton](https://github.com/openai/triton) can generate CUDA kernels. What are the differences between the two when it comes to GPU programming?
Thanks!
PS. This may be something …
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Would like to map all codons/codon pairs in a single plot in order to visualise and identify inhibitory codons/codon pairs, e.g. a scatter plot. This will require an enrichment score for codons/codon …
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Hi, to start I have really enjoyed `eukcc`, so thank you!
I have recently discovered that if my protein files include stop codon marks (`*`) my job fails with the following error message:
```
…