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I have recently been working with .tck fiber tractography files generated by MRtrix3, and all processing steps were conducted within the DWI space. However, upon attempting to open these .tck files in…
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Hi @frankyeh,
I was looking at this code with @mattcieslak
https://github.com/frankyeh/DSI-Studio/blob/8b5b13c2e5e05b83d5ebe8a8234cc715e66242a2/libs/dsi/image_model.cpp#L438C1-L482C2
with a …
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There is a few warnings raised by Cython when we build extensions that should be addressed eventually.
- Cynthon not setting its language level :
grid_intersections.pyx
quick_tools.pyx
streamlin…
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Hi:
I encountered such issue when running command from official document to test the recording function:
```
hongfeij@raspberrypi:~ $ arecord -l
**** List of CAPTURE Hardware Devices ****
car…
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**Describe the bug**
What we do in DSI Studio:
1-Loading a fiber tract file with the following naming scheme: (SubjecName.fib.gz)
2- Loading the corresponding atlas of that subject in the form o…
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## Summary
The reorganized recon structure is really helpful. However, I think it broke the reports. I have a dataset for which I ran the DSI GQI pipeline using a custom JSON that just truncated the …
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## Description
We've found the Neighboring DWI Correlation to be very useful as an automated QC metric. It's currently only implemented in DSI Studio, but is easy to calculate and would be a great …
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I am importing this project into Android Studio. Gradle build fails with this error:
> A problem occurred configuring root project 'Simple Login'.
> Could not resolve all artifacts for configurat…
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Hi Frank! I updated to the latest dsi studio in qsiprep and noticed a couple changes I'd like to check with you.
1) It looks like the accepted values for --tract_id have changed: https://app.circ…
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Hi! I have upgraded to the latest version of the software and used the --other_output=all option, but it did not generate any metrics. These images seem to be contained in fib files, how can these met…