PennLINC qsirecon issues

PennLINC / qsirecon

Reconstruction of preprocessed q-space images (dMRI)

https://qsirecon.readthedocs.io/

BSD 3-Clause "New" or "Revised" License

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issues

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Newest Most commented Recently updated Oldest Least commented Least recently updated

`skip-odf-reports` traits error with `dsi_studio_autotrack`

#104 smeisler closed 1 week ago
2
Update scikit-learn requirement from <=1.4.0 to <=1.5.1

#103 dependabot[bot] closed 9 hours ago
2
Draft pre-init ingression

#102 tsalo opened 1 week ago
4
[DOCS] clean up

#101 mattcieslak closed 2 weeks ago
0
Update nireports requirement from ~=23.2.2 to ~=24.0.2

#100 dependabot[bot] closed 2 weeks ago
1
Bump nilearn from 0.10.1 to 0.10.4

#99 dependabot[bot] opened 2 weeks ago
1
Update networkx requirement from ~=2.8.8 to ~=3.3

#98 dependabot[bot] opened 2 weeks ago
1
Update psutil requirement from <=5.9.8 to <=6.0.0

#97 dependabot[bot] opened 2 weeks ago
1
Update niworkflows requirement from <=1.10,>=1.9 to >=1.9,<=1.11.0

#96 dependabot[bot] opened 2 weeks ago
1
Review open recon-related PRs in QSIPrep repo

#94 tsalo opened 2 weeks ago
0
Compress the tck files

#93 tsalo closed 2 weeks ago
1
Some tck files aren't gzipped still

#92 mattcieslak closed 2 weeks ago
0
Use file lock to avoid concurrent edits to dataset_description.json

#91 cookpa closed 2 weeks ago
1
Make all params and models lower-case

#90 tsalo closed 2 weeks ago
1
Support ingression of precomputed derivative datasets with `--derivatives`

#89 tsalo opened 2 weeks ago
0
Remove unused `--longitudinal` argument

#88 tsalo closed 2 weeks ago
1
Use smaller images in CI for downloading data

#87 mattcieslak opened 2 weeks ago
1
[WIP] Make a system for keeping docs and file names in sync

#86 mattcieslak closed 2 weeks ago
3
Add boilerplate text to pipelines

#85 tsalo opened 3 weeks ago
0
Convert pipeline configs from JSON to YAML

#84 tsalo closed 2 weeks ago
1
Move "scalars_from" field to "input" and "input" to "bundles_from"

#83 tsalo opened 3 weeks ago
0
Write out model parameters to JSON files at dataset level

#82 tsalo opened 3 weeks ago
1
Make the model entity have consistent capitalization for model names

#81 mattcieslak closed 2 weeks ago
2
[DOCS] Add scalar tables

#80 mattcieslak closed 3 weeks ago
0
Move scalar file configs to YAMLs and use a recon scalar workflow

#79 tsalo closed 3 weeks ago
3
AMICO config should probably get some sort of different name

#78 mattcieslak closed 2 weeks ago
1
Add DatasetLinks to dataset_description.json

#77 tsalo closed 3 weeks ago
1
Fix QSIRecon Entrypoint

#76 smeisler closed 3 weeks ago
6
QSIRecon entrypoint wrong in container

#75 smeisler closed 3 weeks ago
0
Non-qsiprep inputs parsed as BIDS

#74 smeisler opened 3 weeks ago
1
Split up connectivity.mat file to follow BEP017

#73 tsalo opened 3 weeks ago
2
Combine `mfp` and `mdp` entities into single `param` entity

#72 tsalo closed 3 weeks ago
1
Replace `mfp` and `mdp` entities with `param` entity

#71 tsalo closed 3 weeks ago
0
Some entities in output files contain prohibited characters

#70 tsalo closed 2 weeks ago
0
Track immediate `Sources` when possible

#69 tsalo opened 3 weeks ago
1
Replace `--recon-input-pipeline` with `--input-type`

#68 tsalo closed 3 weeks ago
1
Replace hyperlinks with BibTeX references

#67 tsalo closed 3 weeks ago
2
Restructure outputs into BIDS datasets

#66 tsalo closed 3 weeks ago
2
Add reportlets to document run-wise DWI and anatomical file information

#65 tsalo opened 3 weeks ago
1
Bump qsirecon_build image version

#64 tsalo closed 3 weeks ago
1
Remove unused data files

#63 tsalo closed 3 weeks ago
1
Generalize ingression and normalization to handle T2w data

#62 tsalo opened 3 weeks ago
3
Add summary reportlets to HTML report

#61 tsalo closed 3 weeks ago
6
Replace atlas config JSON with BIDS-Atlas datasets

#60 tsalo opened 3 weeks ago
1
[ENH] Start HCP ingress functionality

#59 smeisler closed 9 hours ago
11
[WIP / ENH] Add HCP-YA Ingress

#58 smeisler closed 3 weeks ago
1
[CI] Speed up pyafq test

#57 mattcieslak closed 3 weeks ago
14
[DOCS] Reorganize documentation

#56 mattcieslak closed 3 weeks ago
0
Add ng, perng, parng, and mapcoeffs to Dipy MAPMRI outputs

#55 tsalo closed 3 weeks ago
5
Issues with Dipy MAPMRI Outputs

#54 akimbler closed 3 weeks ago
11