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PennLINC
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qsirecon
Reconstruction of preprocessed q-space images (dMRI)
https://qsirecon.readthedocs.io/
BSD 3-Clause "New" or "Revised" License
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[ENH] Handle session-specific freesurfer data in hsvs
#135
mattcieslak
closed
1 week ago
0
Create CI Test for hsvs workflow
#134
mattcieslak
closed
2 weeks ago
0
Add option for ignoring anatomicals in recon-spec
#133
smeisler
opened
1 month ago
1
update from main
#132
smeisler
closed
1 month ago
0
Add missing filename patterns
#131
tsalo
closed
4 weeks ago
19
Plot peaks doesn't work for NODDI in multishell_scalarfest
#130
araikes
closed
4 weeks ago
3
PyAFQ failure
#129
araikes
opened
1 month ago
6
Connectivity matrix plots in reports are broken
#128
araikes
closed
4 weeks ago
1
QSIRecon output directory structure incorrect
#127
smeisler
closed
1 week ago
3
Fix infant anatomical ingression
#126
tsalo
closed
2 weeks ago
9
QSIrecon throwing errors when calculating connectivity from pre-installed atlases and hanging
#125
samuelholly
closed
3 weeks ago
10
—infant results in pipeline flagging missing adult T1w QSIPrep outputs
#124
chiuhoward
closed
2 weeks ago
1
Reorganize atlas management based on XCP-D and BIDS-Atlas
#123
tsalo
closed
1 month ago
1
Datasinks don't work for all of the expected files
#122
araikes
closed
4 weeks ago
3
Fix how bundles to be tracked are selected for DSIstudio autotrack
#121
ameliecr
closed
1 month ago
1
Problem getting the specified bundles using autotrack
#120
ameliecr
closed
4 days ago
2
Error with plot peaks crashes qsirecon
#118
aazor
closed
4 days ago
2
tck files in the connectome2tck folder don't open
#117
mayayab
closed
1 month ago
2
[FIX] mif2fib
#116
ameliecr
closed
1 month ago
0
[ENH] Update AMICO
#115
mattcieslak
closed
1 month ago
0
Use SynthSeg outputs for 5TT
#114
smeisler
opened
1 month ago
4
[FIX] Get the docs building again
#113
mattcieslak
closed
1 month ago
0
HSVS Anatomical Outputs not Written to Datasink
#112
smeisler
closed
4 days ago
2
Add ability to ingress QSIRecon derivatives for additional postprocessing
#111
tsalo
opened
2 months ago
0
Update dipy requirement from <1.9.0,>=1.8.0 to >=1.8.0,<1.10.0
#110
dependabot[bot]
closed
2 months ago
2
Update pandas requirement from <2.0.0 to <3.0.0
#109
dependabot[bot]
closed
2 months ago
2
Update numpy requirement from <=1.26.3 to <=2.1.1
#108
dependabot[bot]
closed
2 months ago
2
Update jinja2 requirement from <3.1 to <3.2
#107
dependabot[bot]
closed
2 months ago
2
Update scikit-learn requirement from <=1.4.0 to <=1.5.2
#106
dependabot[bot]
closed
2 months ago
2
Remove Dependabot Action
#105
tsalo
closed
2 months ago
1
`skip-odf-reports` traits error with `dsi_studio_autotrack`
#104
smeisler
closed
2 months ago
2
Update scikit-learn requirement from <=1.4.0 to <=1.5.1
#103
dependabot[bot]
closed
2 months ago
2
Draft pre-init ingression
#102
tsalo
closed
2 months ago
4
[DOCS] clean up
#101
mattcieslak
closed
3 months ago
0
Update nireports requirement from ~=23.2.2 to ~=24.0.2
#100
dependabot[bot]
closed
2 months ago
1
Bump nilearn from 0.10.1 to 0.10.4
#99
dependabot[bot]
closed
2 months ago
2
Update networkx requirement from ~=2.8.8 to ~=3.3
#98
dependabot[bot]
closed
2 months ago
2
Update psutil requirement from <=5.9.8 to <=6.0.0
#97
dependabot[bot]
closed
2 months ago
2
Update niworkflows requirement from <=1.10,>=1.9 to >=1.9,<=1.11.0
#96
dependabot[bot]
closed
2 months ago
2
Review open recon-related PRs in QSIPrep repo
#94
tsalo
closed
6 days ago
1
Compress the tck files
#93
tsalo
closed
3 months ago
1
Some tck files aren't gzipped still
#92
mattcieslak
closed
3 months ago
0
Use file lock to avoid concurrent edits to dataset_description.json
#91
cookpa
closed
3 months ago
1
Make all params and models lower-case
#90
tsalo
closed
3 months ago
1
Support ingression of precomputed derivative datasets with `--derivatives`
#89
tsalo
opened
3 months ago
0
Remove unused `--longitudinal` argument
#88
tsalo
closed
3 months ago
1
Use smaller images in CI for downloading data
#87
mattcieslak
opened
3 months ago
1
[WIP] Make a system for keeping docs and file names in sync
#86
mattcieslak
closed
3 months ago
3
Add boilerplate text to pipelines
#85
tsalo
opened
3 months ago
0
Convert pipeline configs from JSON to YAML
#84
tsalo
closed
3 months ago
1
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