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PennLINC
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qsirecon
Reconstruction of preprocessed q-space images (dMRI)
https://qsirecon.readthedocs.io/
BSD 3-Clause "New" or "Revised" License
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[ENH] Start HCP ingress functionality
#59
smeisler
closed
5 days ago
11
[WIP / ENH] Add HCP-YA Ingress
#58
smeisler
closed
1 month ago
1
[CI] Speed up pyafq test
#57
mattcieslak
closed
1 month ago
14
[DOCS] Reorganize documentation
#56
mattcieslak
closed
1 month ago
0
Add ng, perng, parng, and mapcoeffs to Dipy MAPMRI outputs
#55
tsalo
closed
1 month ago
5
Issues with Dipy MAPMRI Outputs
#54
akimbler
closed
1 month ago
11
Write out reports to individual reconstruction derivative folders
#53
tsalo
closed
1 month ago
3
Drop Docker wrapper
#52
tsalo
closed
1 month ago
1
`test_dipy_mapmri` outputs folders with node name and node qsirecon_suffix
#51
tsalo
closed
1 month ago
0
Deployment job is failing
#50
tsalo
closed
1 month ago
2
Collect templates from TemplateFlow instead of package data
#49
tsalo
closed
4 weeks ago
4
Drop internal copies of templates in favor of re-orienting TemplateFlow templates
#48
tsalo
closed
4 weeks ago
0
Remove `--longitudinal` parameter
#47
tsalo
closed
3 weeks ago
0
Rename `--recon-input-pipeline` to `--input-type`?
#46
tsalo
closed
3 weeks ago
2
Rename `--freesurfer-input` to `--fs-subjects-dir`
#45
tsalo
opened
1 month ago
3
Replace `--output-resolution` and `--infant` with `--output-spaces`
#44
tsalo
opened
1 month ago
1
Add a workflow that makes interactive report jsons
#43
mattcieslak
opened
1 month ago
0
Maybe add Linden's repo to get controllability measures?
#42
mattcieslak
opened
1 month ago
0
Update docs and trigger RTD build
#41
tsalo
closed
1 month ago
0
Drop and modify infrastructure files
#40
tsalo
closed
1 month ago
0
Drop unused modules, classes, and functions
#11
tsalo
closed
1 month ago
2
Replace/modify `_get_iterable_dwi_inputs` with IO spec YAML
#10
tsalo
opened
1 month ago
1
Remove preprocessing-specific data files
#9
tsalo
closed
4 weeks ago
0
Remove internal version of LiterateWorkflow
#8
tsalo
closed
1 month ago
0
Write out QSIRecon pipeline-wise reports
#7
tsalo
closed
1 month ago
2
Remove QSIPrep-specific parameters and Config elements
#6
tsalo
closed
1 month ago
0
Remove QSIPrep-specific tests
#5
tsalo
closed
1 month ago
1
Start removing QSIPrep-specific code and documentation
#4
tsalo
closed
1 month ago
0
Rename QSIPrep to QSIRecon
#1
tsalo
closed
1 month ago
0
AFQ Recon workflow missing "itk_file" error
#18
pierre-nedelec
opened
1 month ago
2
network connection required for mrtrix_multishell_msmt_pyafq_tractometry?
#15
DVSneuro
opened
2 months ago
1
[BUG] output-resolution shouldn't be mandatory if --recon-input is used
#16
mattcieslak
closed
1 month ago
1
[ENH] Add BabyAFQ
#17
mattcieslak
opened
2 months ago
11
AtlasPack atlas integration
#12
araikes
opened
3 months ago
0
Recon reports are broken
#13
araikes
closed
4 weeks ago
2
Convert recon specs from json to yaml
#2
mattcieslak
closed
3 weeks ago
1
Remove unused preprocessing-specific code
#3
tsalo
closed
1 month ago
5
Reconstruction dwi outputs not included in derivatives when using a custom atlas
#14
pcamach2
opened
5 months ago
0
Allow `--analysis-level group` by calling `qsiprep_group_report`
#95
tsalo
opened
7 months ago
0
pyAFQ within QSIprep does not read --recon_spec json file correctly?
#20
jk619
opened
7 months ago
6
Connectomes from qsiprep 0.13.0RC1 don't seem correct
#19
akelkar26
opened
7 months ago
0
[ENH] Figure out a way to add spatial normalization to the recon workflows
#21
mattcieslak
opened
9 months ago
1
pyAFQ_tractometry: Where is the streamlines.json equivalent?
#22
dkp
opened
9 months ago
7
Citation tools for reconstruction?
#23
pierre-nedelec
opened
1 year ago
1
ODF reports
#24
araikes
opened
1 year ago
5
Mrtrix hsvs ACT reconstruction - convert_fs_brain error
#25
Shade-
opened
1 year ago
9
"OSError: Duplicate node name" when using "--recon-only"
#26
m-petersen
opened
1 year ago
2
Structural connectivity based on individual parcellations
#27
LuRoe7
opened
1 year ago
4
calculate network controllability
#28
pinghongyeh
opened
1 year ago
1
Baby tractography
#29
arokem
opened
1 year ago
5
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