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**AIM:** Add/modify keys in the ivadomed json config file for dealing with microscopy data
Add parameters relative to histology data, examples:
- overlap for inference
- general pixel size (resam…
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Hi Jingyi! The software has been working great so far; thank you for being so responsive.
Is it possible at all the save the registration points or transformation after aligning a histological slic…
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In [`76d8896`](https://github.com/Sulstice/Uptime-Medical-Informatics/commit/76d88969ef25709eebd69f8f5313c106c15bb7a6
), ITK Analysis of Large Histology Datasets (http://www.na-mic.org/Wiki/index.php/…
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In [`033ba22`](https://github.com/Sulstice/Uptime-Medical-Informatics/commit/033ba22df32fa1b11d3ca235d3d0ba0b1f2b73fc
), ITK Analysis of Large Histology Datasets (http://www.na-mic.org/Wiki/index.php/…
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In [`e302546`](https://github.com/Sulstice/Uptime-Medical-Informatics/commit/e302546e1cfc27473a0bddfe70cd63b90ca03942
), ITK Analysis of Large Histology Datasets (http://www.na-mic.org/Wiki/index.php/…
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FYI: This is a website which has a lot of information about histological dyes/stains, including references, CI numbers, formulas, and definitions that would be good to add to ChEBI:
http://stainsfile…
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The diagnosis table includes information about grade, e.g. G3.
In the GA4GH Phenopacket Schema, there is a field "tumor_grade". Usually, grade refers to the histological appearance of tumor cells a…
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In [`b9659a9`](https://github.com/Sulstice/Uptime-Medical-Informatics/commit/b9659a98256c13ff9bd0c7ff9c8c909579d40ac4
), ITK Analysis of Large Histology Datasets (http://www.na-mic.org/Wiki/index.php/…
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I work with the ESCA project, looking at Esophageal adenocarcinoma. However, TCGA has placed squamous cell alongside Adenocarcinoma, the diseases are significantly different leading to the immensely p…
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I have a group of histology slices where I need to label 18 separate probe tracts. However, when I attempt to label probes past probe #11, the software will not respond to the add new probe command. I…