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Dear developers,
I successfully compiled augustus but failed to compile auxprogs. please check the error message. Thanks
`make auxprogs -j 12`
`make[2]: Leaving directory '/home/data/t190303…
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My install steps are:
1. install htslib-develop
unzip htslib-develop.zip
cd /home/sclirl/Tools/htslib-develop
./configure --prefix=/home/sclirl/Tools/htslib-develop
make
make install
(This is ok!)
2. …
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Hi,
I have been trying to install breakdancer but came across this compilation error. Any suggestions? Here is the log:
`ks575@minerva:~/breakdancer-1.1.2/cpp$ make
g++ -g -Wall -O2 -I/home2/ISAD/ks5…
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Not sure if this is related to #6619
The error I'm seeing is:
```
eb HTSlib-1.8-foss-2018a.eb -d --robot=./
== temporary log file in case of crash /tmp/eb-dA4Lxz/easybuild-QYsS5V.log
== resolv…
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In gamgee consumers, such as GATK-c++ / foghorn, it would be very useful to access some math methods implemented in htslib such as gamma distribution function implemented there in (i.e. kf_lgamma whic…
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Hello,
We are trying to install demuxlet on a server at work so that several people could access it, but we have error messages we don't understand and I was wondering if you could help us. We trie…
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Hi,
While building the codebase I found that I had to add the following include to `src/read_bam.h`:
```
#include
```
Error without was:
```
src/read_bam.cpp: In function ‘void connect…
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Hi,
Can you help with this error?
Thanks,
Pat
================================
Resolving deltas: 100% (6563/6563), done.
fatal: unable to look up current user in the passwd file: no such use…
pminx updated
6 years ago
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```
/Users/ian.fiddes/vg/deps/libvgio/include/vg/io/blocked_gzip_input_stream.hpp:6:25: fatal error: htslib/bgzf.h: No such file or directory
#include
^
compilation term…
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Hi folks,
I'm following your instructions in the README for doing a fresh install on my own network. (We were sent some 1cellbio data that I'm trying to analyze).
here are my commands where no …