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From UC Librarian:
I think we need to be careful calling DASH an archiving service, given the low metadata requirements, lack of QA/QC processes, format standardization, etc. I'm a lot more comforta…
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Hello, I'm running the nextflow pipeline with the command:
```
nextflow run salzmanlab/compactors \
-r main \
-latest \
-profile test,docker \
--fastq_samplesheet INPUT/samples…
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Your data:
```csv
priyambial123@github.com
```
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How did you hear about CODECHECK?
From a colleague working in University of Basel
...
What is your motivation to contr…
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Project Assigned: PySAL
Project Link: [https://github.com/pysal/governance](url)
**Project Overview**:
**PySAL** also known as The Python Spatial Analysis Library is an open-source project desi…
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Once all the content is drafted and the platform is selected, there is the question of how we are going to directly interact with course participants. What kind of interactions do we anticipate betwee…
wikey updated
5 years ago
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In the last working group call on 6 Feb 2018 two major themes emerged:
* Tools and infrastructure: mostly small issues and gaps in existing workflows
* Documentation and training, targeted to spec…
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### Description of the bug
I've just upgraded sarek from 3.14 to the latest version. When I run it now it crashes out almost immediately with:
`ERROR ~ Cannot invoke method startsWith() on null ob…
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### Description of the bug
Nextflow is checking Iphop database at the home directory even after specifying another db directory. This will cause error at Iphop step
### Command used and terminal out…
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Hi,
I've used SeqArray::seqVCF2GDS to convert a haploid species VCF v4.2 file to gds format which has variants with multiple alternative alleles due to the nature of our sequencing which involves s…
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Some (most?) highlights posts are about more than one data set. Since the option now is to put one link to "view this data set," some of these posts are picking the "best" data set to link to without …