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We probably need a way to handle redeclaration.
warning: /home/sachsenb/OMS/OpenMS/src/pyOpenMS/pxds/DataValue.pxd:47:8: 'STRING_VALUE' redeclared
warning: /home/sachsenb/OMS/OpenMS/src/pyOpenMS/pxd…
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## Problem Statement
A detailed example of how code snippets in the OpenMS C++ manual can be made executable on Xeus-Cling, Jupyter, Binder. This is similar to the Binder integration of the pyOpenM…
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Add a "decoy" flag here:
https://github.com/OpenMS/OpenMS/blob/develop/src/openms/source/FORMAT/MascotGenericFile.cpp#L85
and then probably here check if it is set:
https://github.com/OpenMS/…
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Hi,
A lab member noticed that *SQL warmup* would take unreasonably long when using `OpenSwathAssayGenerator` from OpenMS v2.8 installed via conda (bioconda channel).
I did some benchmarks, and i…
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```shell
/home/USER/Development/OpenMs/src/openms_gui/source/VISUAL/ParamEditor.cpp: In member function ‘bool OpenMS::Internal::ParamEditorDelegate::exists_(QString, QModelIndex) const’:
/home/USER/…
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Workflow "Peptide Identification from MS": I have downloaded the workflow and the third nod named "Search Engine combination" ist not working. I have checked -> right click -> component > open, there …
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We start the tool with restricted memory:
We get apparently random errors, which I guess are all actually memory errors:
```
Fatal error: Exit code 3 ()
/opt/conda/conda-bld/openms_1518700529…
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Manuel schrieb mir am 23.2.17:
> OpenMS bietet tools für LC-MS/MS daten an. Jetzt hab ich es geschafft meine GC-MS daten in mzML umzuwandeln, aber der featurefindermetabo hat probleme die zu lesen…
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https://github.com/PyProphet/pyprophet/blob/eb048de3014c676d704250cdd443e81af14e32f0/pyprophet/export.py#L59
To get assay_rt, we should be doing exp_rt - lib2expTrafo(delta_rt). Currently, we are s…
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I'm trying to use rainbow to extract HRMS spectra from an Agilent ESI Q-TOF. I run into a problem with the decompression of the MSProfile.bin file though where the lzf decompression fails. The data th…