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First time using this package. I have run an alignment with linclust and am wondering if there is a way of extracting the positional information of the clusters and the distance between them, with the…
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1. I can see your own node information in the http://localhost:7474/browser/, but the secondary Desktop I can't see any node information, database is completely empty.
![1647931636(1)](https://user-i…
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- [ ] Ocultação do menu lateral esquerdo não está ocultando totalmente
- [x] Não vi diferença significante em termos de estilo no page style default/alternative
- [ ] Botão do círculo branco …
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IPR is done with proteins. Coordinates get read in for protein, and then displayed on the mRNA.
As a result, our coordinate locations are always wrong: they span the first 1/3 of the mRNA!
![…
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I'm not sure if this is a minerva issue or something else, but in a test model, the C. elegans gene pmk-1, is displayed in the table as 'information biomacromolecule' instead of pmk-1.
The label fo…
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Is this intersting for GalaxyP?
https://github.com/mpc-bioinformatics/pia
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Hi Alex
I run a trial test and found an error as below:
Command
python3.7 CRISPRloci_standalone.py -f NC_005230.fasta -output NC_005230.fasta.dir -st dna -cpu 32
Final output
summary crispr Examp…
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MolSysMT has to give a name to proteins, small molecules, and entities. These names can be extracted from an mmtf file, but what happens with other forms? We probably need to implement in Sabueso the …
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User should have the ability to view any found match (alignment) at a track (graphic visualization) in the "Browser" panel.
To open the visualization form, user should click the "**View at track**" l…
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Identify at least 2, ideally 3 alternative methods that can use prior information (known targets of transcription factors) to predict TF activities on single-cell transcriptomic profiles.
These met…