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what are the predicted clusters of the cell lines? does the subtype change with drug treatment?
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* data formats: accessibility and challenges
* the open Vs. closed source scenario
* common programming languages: founder's effect and influences from the software development field.
* how new stu…
prvst updated
5 years ago
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The MC2 Center data model does not currently enable assay-specific metadata to be recorded. Adding these models is a critical part of supporting data sharing and reuse. Potential models to add were or…
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First copy [this file](https://github.com/PNNL-CompBio/p3/blob/main/functional/calculate-functional-enrichment.Rmd) to this repo. Then we can run the three tests on the protein data (syn25706561) and …
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When running msPIP function there is a point where the error mentioned in the title occurs.
I was wondering if the following is a valid solution:
```r
nlandmarks
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There is an API which allows to easily retrieve pre-calculated tags of PubMed papers, with extracted bioconcepts including gene, chemical, disease, mutation and species:
![Screenshot from 2020-06-1…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
-Note: The package is currently stored on the Lab github but I do the maintenance and…
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The selection options for
> Where will you submit your data as endpoints?
> 2. What kind of data will you handle:
> 4. Are there any standards that are relevant for you?
are currently (a) somew…
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The number of in-house scripting is alarming in computational proteomics by 2019. The use of in-house scripts is the source of:
- [ ] lack of traceability, reproducibility
- [ ] the more complex …
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