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Currently we don't differentiate between genes and proteins, we just lump them all under gene. However, most go annotation is at the protein level. When we have a go annotation, and we ask quickgo …
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Hi,
I have an experiment wih a whitelist composed of 35 barcodes (60bp long, non standard technology in development) and when I try to run bustools correct I immediately obtain :
(/bioinfo/local…
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https://github.com/jwasham/coding-interview-university
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Hi egaffo,
I'm trying to run circompara on my samples, but I got the following error:
finished circRNA detection from file samples/S1/processings/circRNAs/star_out/Chimeric.out.junction
dcc_fix_s…
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# AllClo
### Unification, harmonizations and validations of high fidelity MoClo genetic assembly standard expansions
Our objective is to create a standard expansion unifying all the previous ones …
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Hello kuixu!
Thank you very much for developing this tool. After looking at the paper on the tool, there are two questions for me.
1. **How to construct the input data with RNA secondary structure…
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Hi,
I am currently trying to parse the steps for the sNS and fNS alignment calculations. Could you help outline the process?
What I've figured out:
- `else if mm_opt == 5 || mm_opt==6)`, call …
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We would like to add Drosophila melanogaster data to work with Julie Aspden and lab, starting with data from [Extensive translation of small Open Reading Frames](http://dx.doi.org/10.7554/eLife.03528.…
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Initial reports can be seen from https://github.com/ggerganov/llama.cpp/pull/8227
> [!IMPORTANT]
> A note for everyone: if you think there's a bug in llama.cpp tokenizer, please make sure to tes…