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Originally reported in the [GATK repo](https://github.com/broadinstitute/gatk/issues/6725):
Affected tool(s) or class(es)
GATK LiftoverVcf
Affected version(s)
gatk/4.1.7.0
Description
The …
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Hi,
I run AA (really nice tool, thank you!) and I was wondering if it's possible to get a bedpe file with the SVs calls, from point 2) of the algorithm ("SV detection: Detect copy number changes an…
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Now that we've renamed the client VM, we should probably name the database something other than `svs.sqlite`, e.g. `app.sqlite`, `securedrop.sqlite`, `sd.sqlite`. Other suggestions welcome.
rmol updated
3 months ago
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ScanScope scanners write metadata to the svs file that includes the scanscope ID, filename, title, scan date, scan time, time zone, and user identifier. If someone used identifying information in the …
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Hi there.
Thanks for an awesome app :)
On iOS you can export save states as `.svs` files, through the app's GUI:
1. Long press game
2. View Save States
3. Long press on save state
4. Expor…
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See #126, but for SVs. This is in addition to filtering against gnomAD.
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Hello...
In the new AWIPS release, whenever I try to update a warning, the warning to be updated doesn't appear in the SVS dropdown box. This has been going on for some time now. How can I fix this…
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[Current](https://staging.kernelci.org:9000/viewer?search=parent%3D6679e066af336ef8c0147ce8) DT kselftest failures on latest linux-next:
- [ ] `/soc/i2c@11009000/trackpad@15`: Will be fixed by https:…
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Original: Visualize CNV files in addition to SVs, and also viewing these together
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Thank you again for the hard work on this.
There is a discrepancy between the colors of the images extracted and the optimal colors such as the one seen in Leica Imagescope. Are you able to incorpora…