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I get warnings when attempting to `makeSignatures` for antimicrobial resistance, length, and width:
```
Warning messages:
1: No signatures for antimicrobial resistance (categorical). Returning NU…
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@kbeckenrode, would you help review that the source, evidence, and frequency are all correct?
I see that the microbe directory sometimes has 'unknown' or 'exp' in the Evidence column and
'usually', …
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### Week 1 - Get to know the community
- [X] Join the communication channels
- [X] Open a GitHub issue (this one!)
- [x] Install the Ersilia Model Hub and test the simplest model
- [x] Write a m…
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## New Picklist Term(s)
### REQUIRED - Current Term Information: Current picklist is relevant to "AMR_phenotype" instead of "AMR_laboratory_typing_platform"
Associated Field(s): AMR_laboratory…
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RE: typo in function name in tutorial for "Predicting future antimicrobial resistance using regression models"
@ https://msberends.github.io/AMR/articles/resistance_predict.html
e.g.
```
# ch…
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**What topic do you wish to add?**
National resources page for Norway (will close #146 )
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GitHub Action Workflow fails with exit code 137, which may be an out of memory error.
Need to confirm this is the problem. If it is, we need to reduce the memory requirement. See https://github.co…
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I used the following command to check the running status of this tool.
bactopia --use_ena --accession SRX4563634 --datasets datasets/ --species "Staphylococcus aureus" --coverage 100 --outdir ena-s…
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We have noticed an issue with AMRfinder not identifying MCR 9 genes present in our isolates. For example, the isolate SRR21865985 contains MCR 9.2 - it is a full length copy of the gene and a 100% ma…
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Hi, I found a error as follows:
(bactopia) lh@chicken:~/Desktop$ bactopia datasets --species "Salmonella enterica" --skip_amr
2022-12-26 13:34:20:root:INFO - Salmonella enterica verified in E…