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Would be great to have an FA template in MNI space. There is a very nice FA template that is referred here: https://www.fmrib.ox.ac.uk/ukbiobank/, and can be downloaded here: http://biobank.ctsu.ox.ac…
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### How to Reproduce
1. Go to https://molgenis.gitbooks.io/molgenis/content/user_documentation/biobank-directory.html
2. Try to setup the integration using this manual
### Expected behavior
The …
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Gene-set burden tests where the genes span multiple chromosomes are difficult to run because regenie [only supports running on a single genotype file set at a time](https://github.com/rgcgithub/regeni…
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http://purl.obolibrary.org/obo/OBIB_0000732 owns
http://purl.obolibrary.org/obo/OBIB_0000735 is owned by
Object properties should be in RO when possible.
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Hi,
Thanks for the invaluable tools and tutorial resources you provided!
I am currently working with imputed data from the UK Biobank, and I have encountered a challenge regarding the storage si…
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As an idea for a dataset with a "story", we could use mapping of diseases in dog breeds, which can be done with a simple filtering for fixed mutations in the disease group (kind of like a very simple …
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In the BBMRI catalogue there are several forms that use drop down lists that fill with data items from other tables. You can type part of the name to find them. However when I type text sometimes some…
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I just saw a talk about how there is heavy right censoring in the UK Biobank (>90%). The speaker mentioned that they needed to use a saddlepoint approximation to account for this right-censoring. Not …
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Measurements and clinical attributes representation (UK biobank and GWAS representation) (OTAR, GWAS). The EFO measurement hierarchy is used to annotate a number of gwas traits. Often the link to th…
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### How to Reproduce
1. Import [biobank_ontology.owl.zip](https://github.com/molgenis/molgenis/files/2212963/biobank_ontology.owl.zip)
1. Add a user
2. Add a group
3. Make the user editor of the g…