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Documentation to setting up instances of KG on AWS: https://github.com/clinical-biomarkers/biomarker-partnership/tree/main/supplementary_files/documentation
Goal: Create knowledge graphs and cyph…
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# Please follow the general troubleshooting steps first:
- [x] I read the README and followed the instructions.
- [x] I am sure that the used CSL metadata follows the [CSL schema](https://github.c…
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Project Lead: @rgiessmann, @teddygroves
Mentor: @NPalopoli
***
Week 1: Meet your mentor!
- [x] Meet mentor for 30 minutes
- [x] Create an account on [GitHub](https://github.com)
- [x] Che…
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@nicklynch said
> RSC have created a linkset for a 100 K mini dataset for SureChMBL
> Linkset download for 100K http://ops.rsc.org/download/RDF-2016.01.12.zip
>
> There is properties in this but w…
stain updated
8 years ago
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Hello:
I want to use Lotus to reconstruct evolution of natural products on phylogenetic trees. I began entering some references and taxon:compound pairs that are not in Lotus (or Wikidata) and found …
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Wikidata has a lot of exposures associated with symptoms/disease. From NIOSH?
https://github.com/cmungall/environmental-conditions/tree/master/src/resources/wikidata
- [ ] gap analysis of wikidata ex…
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if a chemical entity is absent from chebi, submit to chebi and import back into the resources (e.g. using onto fox)
e.g 1.4 dioxane, chlorforme d1 and so forth.
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When indexing is performed with IndexBuilderMain by streaming RDF serialized in Turtle, indexing will fail if the input has `@prefix` directives after triples.
Example input: https://ftp.ncbi.nlm.n…
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Those of us in the MD community would very much like to be able to take output from QM packages and take it directly into MD engines and chemistry toolkits we use. However, these typically require wha…
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The schema has inline docs detailing the mapping but we should provide a higher level guide. I will sketch out in this ticket and then this can be turned into docs on the site. I'm doing quickly so if…