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Hello! Great tool you have developed.
I was curious as to the specific preprocessing steps for the proteomic data. For instance, CPTAC LUAD seems to contain 11485 proteins, where the original was …
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## Describe the issue linked to the documentation
### Context
We discussed with @glemaitre and @GaelVaroquaux about documenting missing-values practices for prediction in scikit-learn as part of…
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#### Description
I was wondering if there was interest in adding a new imputation strategy (or a new Imputer class) based on a Gaussian Mixture Model (GMM) using the EM or CEM algorithm. The …
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Hi Ramon,
Ran into an issue running your code -- any insight would be greatly appreciated.
In gtex_generator.py, you read in a file called 'GTEX_data.csv' for the GTEx file, and another file of …
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Based on the pairing rules defined, there are two possible outcomes when generating the FHIR resources that represent a condition (e.g., diabetes, MI, HF, etc): the FHIR resource is created, with an '…
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When I try to use `bayes_R2()` on a `brmsfit_multiple` object, I get a warning message that only the first imputed data set was used. I assume this means that R2 was only calculated using the first im…
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Hi
I'm trying to do some imputation checks by masking the genotype data and it worked well with the original file but always get errors when I use the file that I added random 9(missing value) into t…
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Hello, I have some problems when I run the gwas_summary_imputation.py.
Here is my script:
```
python ~/summary-gwas-imputation/src/gwas_summary_imputation.py \
-by_region…
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Thank you very much for creating such an excellent product. As a beginner, I am sorry to trouble you with a question regarding the creation of PRS using PRSice2. My target data is divided by chromosom…
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# Implementation of a Masking Stage with Random Masking Options
## Problem
The absence of a dedicated masking stage in our pipeline limits our ability to handle incomplete or noisy data effectively d…