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I am processing some rodent data which includes forward and reversed phase-encoding direction DWI scans. I am finding that the reversed scan does not display consistent orientation relative to the oth…
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From an idea brought up during https://github.com/spinalcordtoolbox/spinalcordtoolbox/issues/2959:
Currently `sct_testing` will call `sct_download_data -d sct_example_data`. It puts the downloaded …
kousu updated
5 months ago
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The maintenance burden to keep all contents synchronized across episode Markdown files, Jupyter notebooks and the solution Jupyter notebooks is considerable. Whenever a change is made to an episode, i…
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Hello nbval folks, first of all thanks a lot for your plugin! :)
We've decided to use it on [ipycytoscape](https://github.com/QuantStack/ipycytoscape/) but we found a problem.
Currently we're having…
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I have single shell (one b0 and 35 b1 volumens) data with low b-value (b1=1000). I applied common pre-processing steps (denoising, unringing, preproc and bias correction). I estimated the response fun…
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The BIDS 1.x directory structure places scans within anat, func, dwi folders. Within each folder one can have multiple different scans. I propose to go back to the one scan per folder structure so a…
tsalo updated
4 years ago
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Dear Zhang, I am Hou Xiaolin, a neurosurgeon from the Affiliated Hospital of Chengdu University of Traditional Chinese Medicine. I was lucky to see your Supwma study. I used your Git code. According t…
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Hi !
I'm trying to register anatomical T1 to diffusion b0 image using sdcflows version 2.1.1, with the Syn option as I don't have any fieldmap nor b0 with opposite phase encoding.
I affine regis…
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## Project info
**Title**:
*PyNets*
**Project lead**:
Derek Pisner / @dPys
**Timezone**:
UTC−06:00
**Hub**:
**Description**:
PyNets is a tool for sampling and analyzing varieties of…