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It would be helpful to have a wrapper function for running multiple realizations of the same simulations from `simulate_tree()`, etc.
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For some reason, the blog categories do not display properly when selected.
https://github.com/user-attachments/assets/913ded93-03d5-4267-85e9-dfc5910ad890
I works without issue when navigating…
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Useful to have overview of how to edit app functionality and how it fits together for experienced R users who have less shiny experience. Could use issue #2 and issue #3 as motivating use cases for th…
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currently, the plot() outputs are lost in the background. possibly the standard suggested action item would be to try to keep the default white background.
![image](https://github.com/user-attachment…
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Following #95, it would be good to provide a way to stitch / consolidate pipelines into a single report.
After #95, the "middle-task" pipelines, such as the transmissibility pipeline (Rt estimation…
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@nsbatra - if we were going to look at expanding to offer other templates, this would probably be where to start
https://www.who.int/emergencies/outbreak-toolkit/standardized-data-collection-tools/…
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hi @Bisaloo , could you help us create one new branch for the `epitkit` tutorial repository? This repo will host the code and challenges available in the MOOC
The `epitkit` logo is in this comment …
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Please also add explanation for why a disease is a priority and the use case that it applies to (including R packages). E.g. an ***Ebola*** onset-to-death distribution is required for calculating the …
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Issue #1 proposed having a vignette which included:
1. Read in and tidy data
2. Fit negative binomial model with {fitdistrplus}
3. Apply summary metrics from {superspreading}
4. Simulate with {b…
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Suggestions by @smwindecker and @mgrabow2 highlighted two related features that could be helpful:
1. Would be useful to allow a user to create several local `epidist` objects (e.g. in a script) the…