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**Description**:
The frequency of use (FOU) phenotype for NGC continues to be flipped in the opposite direction from the other NGC phenotypes (OAall and OAexp). See figures in GitHub issue 140 in the…
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I can run all the processes smoothly now, but there are still some questions.
Firstly, I could obtained all the results of "Pathway_list" and "scPathways_rankPvalue". However, I could not find a fun…
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Dear Florian
Firstly, I'd like to thank you for developing a robust PRS method, SCT.
I am reproducing the result of 'Making the Most of Clumping and Thresholding for Polygenic Scores'. However, …
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Hi everyone,
I have a question about the difference between --h2 and --h2-cts flags. I know that h2-cts is used to partition heritability to cell-type-specific annotations and LDSC performs a one-s…
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Expected Behavior
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For Bugs:
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### Environment
#### Steps to Reproduce
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# What features do we need, and how should they work?
Here are some features we've discussed as being potentially useful / necessary, along with a discussion of open questions about how they should…
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Hi,
I want to check something- Following the tutorial, to compute the LD score for my own annotations I used the lists of HapMap3 SNPs and the PLINK data from 1000G_EUR_Phase3_plink folder. Howeve…
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Dear Author,
I have been using LDpred2-auto for my analyse…
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Hi，
When I use the function “MRlap”，there is always a problem：
Error in tidy_inputGWAS(exposure, need_chrpos, verbose) : 'HeaderGWAS' not found
OR
Error in h (simpleError (msg, call)):
An error o…
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Hi,
My results have amounts of Inf and NA. Why did it happen like that?
Best rega…