-
I've just been reviewing the branch shown below (with current EC/RHEA xrefs):
```
histone demethylase activity
|__histone demethylase activity (H3-R2 specific)
|__histone demethylase activity (H…
sjm41 updated
2 years ago
-
Should this be
is_a
GO:0140658 | ATP-dependent chromatin remodeler activity
@colinlog
@pgaudet
-
As the modifications will move from BP to MF, I need an MF term to describe
the activity corresponding to this process:
GO:0071894 histone H2B conserved C-terminal lysine ubiquitination
Defini…
-
Hi,
Is there a pre-trained version of Epitome available for the model used to get the performance described in the paper? I would like to apply it to my own data without retraining.
Thanks,
Ala…
-
https://www.ebi.ac.uk/QuickGO/term/GO:0140566
This term has the parent "transcription regulator activity"
but if a heterochromatin is the 'default state' these are not all directly regulating tra…
-
Hi GO,
I would need a couple of terms for 2 histone modifications that are not yet described in GO
Thanks
Sylvain
1)
NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E35 specific…
-
Hi, I'm working with the `CometAdapter` and I have some issues. When I search a light file with some variable modifications it works fine. But when I use a quite big file (for instance a 2.2GB mzML) a…
-
Hello,
As part of the project of removing single step BPs from the ontology (and moving them to MFs as appropriate), the proposal has been made to obsolete GO:0018101 protein citrullination & chil…
-
Hello,
To rehouse some annotations due to the obsoletion of histone dephosphorlyation (see #23145), @sylvainpoux is requesting 'histone phosphatase activity'
To be consistent with other histon…
-
Hello,
With @hattrill @ValWood and @RLovering we have produced a new generic subset for MF
It has much fewer binding terms (6, while the current has 16)
Terms in the new generic subset:
…