-
Trial curation of this paper into main PHI-Canto tool by Chris Stephens (final year PhD student)
https://canto.phi-base.org/curs/6ddeb3a009b5a0e5
We talked through the curation of Fig 2B and 2D …
-
Finds this term
GO:0085030 | symbiotic process benefiting host
defined
GO:0085030 JSON
Definition (GO:0085030 GONUTS page)
A process carried out by symbiont gene products that enables a sy…
-
### Sabu, C., Henna, T. K., Raphey, V. R., Nivitha, K. P., & Pramod, K. (2019). Advanced biosensors for glucose and insulin. Biosensors and Bioelectronics, 141, 111201.
24/03/2021
Review of…
-
After discussion with @CuzickA yesterday.
At present we have been adding a disease extension to PHIPO annotations. I'm really against this as it is repetitive and redundant and often it isn't …
-
(Requested by @CuzickA)
Since we added the new disease annotation type, we don't need the old 'disease caused' annotation extension anymore. Unfortunately, there are still about 90 extensions alrea…
-
A while ago we decided that we want to curate all control metagenotypes for both G-f-G and non-G-f-G sessions. The reason for this was to make it clear what the control phenotype was before creating a…
-
After some discussion about the 'disease caused' extension, we decided it shouldn't need to be provided as an annotation extension in most cases because PHI-base already has a list of diseases for com…
-
GO:0009405 pathogenesis
Has the comment: note that this term should not be used to annotate gene products that are involved in the host response to pathogenesis. It should only be used to annotate tho…
-
Link to curation session
http://canto.phi-base.org/curs/3b2c44b436098af1
Link to NTR on GO tracker
Question about PAMP binding (receptor decy activity)
https://github.com/geneontology/go-ontolog…
-
Recently, Travis-CI announced that https://travis-ci.org will be phased out in favor of https://travis-ci.com and that the remaining automated builds will be (understandably) metered for accounts wit…