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I would like to regress out covariates from the data but didn't want to do the data centering nor scaling. However, when I tried using do.center=F. The expression level I got is still centered with …
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Hi,
Thank you for your work in building such a great Python repository!
I have recently used this repository; however, I am a bit confused regarding the three input data types.
I believe that…
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Hello,
I have 5 depression questionnaire items from the SCL measured repeatedly in a sample of mothers during and after pregnancy (for multiple pregnancies). There are 61k participants. The median …
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### Description of feature
Instead of treating every dot in an embedding (visualization) as a cell, we want to summarize the whole perturbation as a dot.
Features that we need:
1. Generating pe…
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Hello,
First of all thank you for this package!
I wanted to see if there were any recommendations for using the joint latent class model for interval censored events, since I notice that the doc…
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I am comparing Integration methods using the `IntegrateLayers()` function and am running into an Error when trying to use the scVI method. The other methods (harmony, rpca and cca) I have tried work f…
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Hello Dr. Seol,
Thank you for your fantastic work on this Jamovi module.
Besides BIC and AIC, it would be great if you would include new estimators to evaluate the fit of the model (**SABIC** = sam…
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In about a week I will retire from work, so from then on I could look more closely into these issues. But I think we are already on the right track!
A question: should we do all our communication v…
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Dear Professor, I'm a big fan of **pomp**. I want to add the time-varying function beta=exp(cubic spline) to a simple deterministic SIR model, I tried many times but failed, I would like to ask for yo…
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Dear Cécile and dear Viviane,
Thank you for your great package.I am reading your [Estimation of Extended Mixed Models Using Latent Classes and Latent Processes: The R Package lcmm](https://www.jsta…