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Hi thank you for your great work.
Could you release code for running Swin UNETR on MSD dataset?
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Would it be possible to share a dataset link? The existing one in medium doesn't work. It would be really helpful.
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Hi,
first of all thanks for this framework, it is very useful.
I had a question regarding the notebook for the DICOM example under "./examples/LCTSC_DICOMInterface.ipynb"
what is the need of …
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Hi, would you be able to add example script how to connect pre-processing in R and follow up with autoencoder in Python please?
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I find the code finally output 13 classes' results, but in inference_synpase.py, you wanna 8 classes like other papers. i wonder is the final result save in "summary.json"? and when i reproduce the co…
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Hi,
When read h5ad file with SCP with this code:
```
adata
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Ive taken the default radiology app and used it to train a deepEdit model to do volumetric MRI pancreas segmentation.
The auto segmentation works well however I am experiencing a strange issue when…
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Hi. I'm currently using the the muscle_adipose_tissue pipeline and it works perfectly.
However, I run into some issues when trying to use the spine_muscle_adipose_tissue and liver_spleen_pancreas pip…
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Dear CellChat developors,
I am Luca and I work in the Diabetes field. I have a big dataset with more than 30 samples from pancreatic islets (which are mainly based on beta cells) and I cannot seem…
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For PTV burdens we made 3 different analysis:
In the first analysis the PTV burdens were cut off at the median, that is how we got the two group: Low and High burden.
In the second analysis the PTV …