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Hello,
Thank you very much for Reactome in the graph database format.
I see that the schemaClass, Pathway for stId:"R-HSA-109704" shows hasDiargam:true, but I do not see a figure relationship t…
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We need to have a list of example questions that can be asked. We need this for two purposes. First, the example list of questions that could be asked is now woefully small at the main UI: http:/rtx.n…
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Random Notes:
- a layout (cose-bilkent) is being run twice on the interactions network
- it takes roughly 15 seconds to load the network and see the network with most of the interactions stylesheet …
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Hi Kevin,
MWE in RTX: `pc.uniprot_id_to_reactome_pathways("P68871")`.
- First we will get [http://www.pathwaycommons.org/pc2/search.json?q=P68871&type=pathway](http://www.pathwaycommons.org/pc…
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Using this library from here:
https://www.npmjs.com/package/amigo2-instance-data
Problems using this link:
http://xenademo.berkeleybop.io/ribbon/?subject=HGNC:12373
- [x] reactome link is …
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I've had a look at data coming from the metadata service running over the identifiers.org dataset, and there are cases where it "complains" of multiple JSON-LD entries, but it looks like they are legi…
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When I compared O. sativa with prunus, i get the table, and sometimes it goes to the pathway view as well wit yellow and blue color...but after a while the colors disappear and a text box says..
'The…
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My local Reactome environment hosts its own web ContentService/. That service calls PSICQUIC to get a URL registry of available interaction data services, including BAR. Using the resulting provider U…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/koralgooll/MulEA
Confirm the following by editing…
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The portion of the hierarchy that leads to the reactions associated with the gene of interest are displayed as in the Locations in Pathway Browser section of this page http://plantreactome.gramene.org…