-
The following tasks from #91 are left over to finalize the implementation of the `KElbowVisualizer ` and improve it.
*Note to contributors: items in the below checklist don't need to be completed …
-
Hi,
I am having a problem with clustering a data set. The data has been extensively filtered before clustering to remove uninteresting samples, so I would expect that the vast majority of samples c…
Phlya updated
5 years ago
-
好全面的工具！非常棒！
great work!
a issue about cnmf_obj.k_selection_plot()
```
import numpy as np
## Initialize the cnmf object that will be used to run analyses
cnmf_obj = ov.single.cNMF(adata,component…
-
Looks like PCA will be harder than we though.
When I take the first 10 principal components (after whitening), they collectively only explain about 18% of the variance. I'm not sure if the problem is …
-
### People
---
|效果|代号|效果|代号|
|:-:|:-:|:-:|:-:|
|:bowtie:|`:bowtie:`|:-1:|`:-1:`|
|:smile:|`:smile:`|:thumbsdown:|`:thumbsdown:`|
|:laughing:|`:laughing:`|:ok_hand:|`:ok_hand:`|
|:blush:|`:blush…
-
Hi! Thank you for an interesting package and work.
I installed the package in a new venv. However, it throws a `ModuleNotFoundError` when trying to import PyGRF due to matplotlib missing. More spec…
-
## Versions
**river version**: 0.15.0
**Python version**: 3.10.4
**Operating system**: macOS Ventura 13.2
## Describe the bug
I tried to run a river's clusterer (CluStream, specifically…
-
ss = np.zeros(16)
k = 0
for i in np.arange(2,18):
ss[k] = np.round(acdc.get_opt.GS_metric_value(adata, n_clusts=i),7)
k+=1
import seaborn as sns
df = pd.DataFrame({"n_clusts":np.aran…
-
Hi,
I am trying to run the HMRF on some data for which I have the raw expression matrix and the spatial locations as .csv files. I am basically running the following:
```
raw_matrix
-
I have implemented cluster validation indices both internal and external Indices as part of my package.
I have 40 such indices which are tested and packaged as such into a Package called [CRAVED](…