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drieslab
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Giotto
Spatial omics analysis toolbox
https://drieslab.github.io/Giotto_website/
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coord_fix_ratio does not work as expected
#972
kaizen89
opened
5 days ago
0
About spatial proximity test
#971
Pedramto89
opened
1 week ago
0
fix: package checking
#970
jiajic
closed
3 weeks ago
0
fix: package checking
#969
jiajic
closed
3 weeks ago
0
chore: catchup to suite_dev
#968
jiajic
closed
3 weeks ago
0
Fix error in `plotInteractivePolygons()`
#967
josschavezf
closed
3 weeks ago
0
update examples and updates following rcmdcheck
#966
josschavezf
closed
3 weeks ago
0
Stereo-seq tutorial: Error in Giotto::anndataToGiotto(anndata_file) : object 'sc' not found
#965
MatteoRiva95
opened
3 weeks ago
9
Creating Polygons with Interactive Selection Tool
#964
jweis3
closed
3 weeks ago
7
chore: code reorganization
#963
jiajic
closed
1 month ago
0
v4.0.7
#962
jiajic
closed
1 month ago
0
go back to 1:, add examples and fix null variables
#961
josschavezf
closed
1 month ago
0
createGiottoCosMxObject: Error in cat
#960
GBeattie
closed
1 month ago
2
replace 1: -> seq_len()
#959
josschavezf
closed
1 month ago
0
error in installing Giotto
#958
LinZhang1004
closed
1 month ago
2
add examples
#957
josschavezf
closed
1 month ago
0
binSpect function error on large datasets
#956
rocketeer1998
opened
1 month ago
0
add examples
#955
josschavezf
closed
1 month ago
0
update following BiocCheck recommendations
#954
josschavezf
closed
1 month ago
0
spatialDWLS bug fixes and 0-gene resolution into NA deconv fractions.
#953
xazra
closed
1 month ago
0
v4.0.6
#952
jiajic
closed
1 month ago
0
spat/exprCellCellcom can return Inf/Inf- values that error plotCCcomDotplot
#951
rbutleriii
closed
1 month ago
1
chore: catch up to suite_dev
#950
jiajic
closed
1 month ago
0
spatCellCellcom does not allow verbose='none' if do_parallel=TRUE
#949
rbutleriii
opened
1 month ago
0
Error in DWLS deconvolution result with Pie plots
#947
Umaarasu
closed
3 weeks ago
2
An empty giottoPoints object can corrupt the giotto obj
#946
rbutleriii
opened
2 months ago
4
Applying ext and spatShift tranformations on gobj
#945
rbutleriii
closed
1 month ago
2
chore: catch up to suite_dev
#944
jiajic
closed
2 months ago
0
Error in createGiottoVisiumObject
#943
krigia
opened
2 months ago
1
Giotto installation Error: object 'get_dimReduction' is not exported
#941
jiangzh-coder
closed
1 month ago
2
Error in stats::kmeans(x, centers = 2, nstart = nstart, iter.max = iter.max)
#940
rocketeer1998
opened
2 months ago
0
enh: add instructions param
#939
jiajic
closed
2 months ago
0
fix: typo
#938
jiajic
closed
2 months ago
0
Modular readers
#937
jiajic
closed
2 months ago
0
Modular readers - update to working ver
#936
jiajic
closed
2 months ago
0
fix: catch empty condition of cosmx_dir
#935
jiajic
closed
3 months ago
0
chore: improve docs
#934
jiajic
closed
3 months ago
0
fix: namespace issue
#933
jiajic
closed
3 months ago
0
feat: add cosmx reader proto
#932
jiajic
closed
3 months ago
0
I did not find the slice@minmax parameter, slice@minmax parameter, slice@boundaries parameter, etc. Where should I find them?
#931
sunjiahe-hub
closed
4 weeks ago
1
sync suite
#930
Ed2uiz
closed
3 months ago
0
v4.0.5
#929
jiajic
closed
3 months ago
0
v4.0.5
#928
jiajic
closed
3 months ago
0
add package check for complexheatmap in heatmSpatialCorFeats
#927
RubD
closed
3 months ago
0
Suite dev
#926
RubD
closed
3 months ago
0
About silhouetteRankTest
#925
nnnanchen
closed
3 months ago
0
Error in overlapToMatrix
#924
TengyuZz
opened
3 months ago
0
Fix Error in spatialDE
#923
josschavezf
closed
3 months ago
0
"filterGiotto unused arguments" AND "failed to initialize requested version of Python"
#922
vagm110901
closed
3 months ago
3
v4.0.4
#921
jiajic
closed
3 months ago
2
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