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Currently, we plan the building of a knowledge graph of entities using our type graph of identifiers. In this type graph, nodes are identifiers and edges are services that transform one identifier in…
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Searching for dopamine gives 177 targets including ADMET, cell-lines and organisms. I don't understand why all these are returned. Current ChEMBL gives 51.
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Hi - is there any possibility of including ChEMBL in OXO?
cheers
Jane
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Hi--
I'm trying to build openbabel-1.100.2 on Darwin OS X Tiger, downloaded from sourceforge and then another attempt at using DarwinPorts with the same result. I configure fine and build up until …
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Hi, I am trying to reproduce the result from your pubchem-parse.py and somehow I get a timeout error. How can I resolve it?
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Currently we build the id-mapping tables from a) UniProt and ChEBI data (from the ERs' xrefs, after converting the original text data to BioPAX warehouse data models) and b) from manually created spec…
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As shown in database.ipynb, there is a large-size l1000.db file, containing the gene expression profiles and meta data of lincs. Here could you publish the code to produce the l1000.db and/or the l100…
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I am starting a thread regarding the OSM's submission to the Open Science Prize. The following is a link to a shared Google Drive folder ( https://drive.google.com/open?id=0B6PPGQnT9f4FLXFlZmluLUFTQWc…
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http://sark.ebi.ac.uk:3021/curation/curate#1763548
Just added this compound and ChEMBLID in identifiers is hyperlinked to the interface but as it's a new compound, of course it won't have a page so n…
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Hi all, looking for some clarification/advice on InChi strings perhaps @murrayfold @cdsouthan or @madgpap could help but please chime in if you know.
I was just looking through the compound list as I'…