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Hi @TaWald,
I would like to check which information was crucial to replicate lesion-wise evaluation which is used for HD-BM paper.
What I have found in the supplement document is the following:
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I'm using the Unet_3D_Medical and I had to change some parameters to reach my goal but I'm having trouble to find where to change the expected output of the network. I searched all files but didn't fi…
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![image](https://user-images.githubusercontent.com/79499756/144780924-a1800fe1-147a-4e36-88c5-a1c29c22d044.png)
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so i've got a set of 3D images (128, 128, 128) (both images and their appropriate masks). I want to run this implementation of UNet on it. How would I do this? They're `.nii` files so i've coded up my…
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Why do you give the image_size flag value 256 when the slices are of size 240x240?
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Hi Nikki,
I am trying to replicate your model for brain tumour segmentation to explore image analysis tools and algorithms. After carefully implementing your model, I got either completely blank pr…
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Would you please specify the dataset link? I opened the ADNI link that you have given and in the "Data and Sample" section there is MRI image but it has no T1-weighted images.
ghost updated
3 years ago
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Hi there,
thank you so much for the great work on the medical segmentation example using nnU-Net. This implementation is much cleaner than ours and offers a lot of functionality on a well-maintaine…
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Hello, I have changed your program, and it can run smoothly without any error. However, I have observed that the value of label does not seem to be passed in. May I ask if there is such a problem in y…
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can we have details on the brats.hd5 to create the same file please ?