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One sample:
![image](https://user-images.githubusercontent.com/366003/39885720-4e04ce9a-545b-11e8-8a8f-8db8e446e039.png)
Multiple samples:
![image](https://user-images.githubusercontent.com/366…
jjgao updated
4 years ago
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As described here (https://github.com/cBioPortal/cbioportal/blob/master/docs/File-Formats.md#data-files), attribute charts should be able to be hidden in the study view when given a priority value of …
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On the evolution chart:
https://www.cbioportal.org/patient/genomicEvolution?studyId=lgg_ucsf_2014&caseId=P04
Add a new button to show only specific samples. Can look same as current group by:
…
inodb updated
4 months ago
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RNA expression in oncoprint broke with latest release. Let's add a screenshot test of e.g. this oncoprint:
https://bit.ly/3tBS1vI
See also:
https://github.com/cBioPortal/cbioportal/issues…
inodb updated
6 months ago
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I've just seen a problem building a Debian package for cBioPortal. I'm using jdeb, so I'm packaging on a different system to deployment. The problem is in the `log4j.properties` file, which contains t…
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When frontend project building, there is a error: https://jitpack.io/com/github/cbioportal/cbioportal-frontend/d6e3c2cbfafc38b8d0f710d5b854e583fdb5b668/build.log
```
[INFO] (Emitted value instead…
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**Main use case**
A non-computational user has staging files of a study (may still contain errors and formatting issues) and would like to create a cBioPortal instance to visualize the study.
**Fe…
inodb updated
6 months ago
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Would be nice to update from Mysql 5.7 to Mysql 8 when updating to the next cBioPortal release (3.0.0).
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In this blueprint I will detail the steps needed to update cBioPortal source code and deployment details to run MySQL 8 (current version is MySQL 5.7)
# Step 1
MySQL requires new _allowPublicKeyRe…
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Currently our prod cluster using `coreos/prometheus-operator`
- https://github.com/knowledgesystems/knowledgesystems-k8s-deployment/blob/master/monitoring/README.md
- `coreos/prometheus-operator` …