cBioPortal cbioportal issues

cBioPortal / cbioportal

cBioPortal for Cancer Genomics

https://cbioportal.org

GNU Affero General Public License v3.0

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issues

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0.5.66 cbioportal-frontend-commons missing 'juice' module

#10878 leexgh opened 12 hours ago
0
NullPointerException: Cannot invoke "java.util.Map.get(Object)" because the return value of "java.util.Map.get(Object)"...

#10877 sentry-io[bot] opened 15 hours ago
0
Refactor SessionServiceController to reuse some of the SessionServiceRequestHandler methods.

#10876 forus opened 18 hours ago
1
remove unneeded references to old tables

#10875 sheridancbio opened 4 days ago
1
keycloak docker image no longer available from docs

#10874 fishcakess opened 4 days ago
0
Support of negative value entrez_gene_id genes in clickhouse table development

#10873 sheridancbio opened 5 days ago
1
Additional review needed for the identification of WGS/WES samples in clickhouse table development

#10872 sheridancbio opened 5 days ago
1
Clarification needed on how to handle missing gene panel identifiers in data files

#10871 sheridancbio opened 5 days ago
1
wrong message when access unauthorized study or wrong study id

#10869 jjgao opened 6 days ago
0
Enable heatmap for non-z-score expression data in oncoprint

#10868 jjgao opened 6 days ago
0
Consolidate SQL files used to create CH Tables

#10867 haynescd closed 6 days ago
1
On Plots Tab Incorporate treatment viz

#10866 inodb opened 6 days ago
0
Add Test of Treatment Enrichment to Group Comparison

#10865 inodb opened 6 days ago
0
Frontend v6.0.9

#10864 dippindots closed 5 days ago
1
Demo rfc80 poc violin plot

#10863 uklineale closed 17 hours ago
4
Study Summary Page Fails for Shared Virtual Study with Protected Samples

#10862 forus opened 1 week ago
3
Validate data does not work when authentication is on

#10861 inodb opened 1 week ago
0
Allow Resources IFrame to redirect to other domains

#10860 inodb opened 1 week ago
0
Make clear in data loading that one can run it inside of docker

#10859 inodb opened 1 week ago
0
Rfc80/fix alteration counts total profiled counts

#10858 haynescd closed 1 week ago
1
Rfc80/fix patient level filtering for alteration counts endpoints

#10857 haynescd closed 1 week ago
1
Fix missing import

#10856 alisman closed 1 week ago
0
Demo rfc80 poc genomic data count

#10855 fuzhaoyuan closed 1 week ago
1
:sparkles: Add StructuralVariant-genes endpoint

#10854 haynescd closed 1 week ago
1
Plots tab - having multiple generic assay with same assay type and different datatypes

#10853 kalletlak opened 1 week ago
0
Data download feature broken

#10852 kalletlak opened 1 week ago
0
Add docs on how to add COSMIC v2 vs v3 data

#10851 inodb opened 1 week ago
0
Mutated-genes endpoint errors when we filter by patient level clinical data

#10850 alisman closed 1 week ago
0
Reimplement sample-lists-counts endpoint using Clickhouse

#10849 alisman closed 1 week ago
0
Performance

#10848 inodb closed 1 week ago
0
Do not use clinical data MVs

#10847 onursumer closed 1 week ago
0
Fix study view clinical data scatter plot

#10846 alisman closed 1 week ago
0
Rfc80/add cna genes endpoint

#10845 haynescd closed 1 week ago
1
Remove servlet-api dependency from mockserver-client-java

#10844 dippindots opened 1 week ago
1
Remove possibility to create a Virtual Study by anonymous user

#10843 forus opened 1 week ago
3
Add validator check for data_gene_matrix.txt

#10842 inodb opened 1 week ago
0
Remove demo-rfc72 reference from integration test

#10841 dippindots closed 1 week ago
1
Molecular-profile-counts service implementation

#10840 alisman closed 1 week ago
0
ClickHouse-Only cBioPortal Demo based on standard schema

#10839 sheridancbio opened 2 weeks ago
0
Remove servlet-api from dependencies

#10838 inodb opened 2 weeks ago
0
Demo rfc80 density plot

#10837 uklineale closed 2 weeks ago
1
E2etests Screenshots - invalid path names block git checkout in Windows environment

#10836 pappde opened 2 weeks ago
2
Density plot clickhouse

#10835 uklineale closed 1 week ago
1
2 critical vulnerabilities in version 6.0.5

#10834 TJMKuijpers opened 2 weeks ago
0
Fix clinical data counts (use new view that materializes null clinical data entrees)

#10833 alisman closed 1 week ago
0
Clinical data tab: table gives no results after sorting on patient ID or Sample ID

#10832 AnikaBongaarts opened 2 weeks ago
0
Clinical Data Table TSV file download is not in TSV format

#10831 pappde opened 2 weeks ago
0
Broken link: Custom Clinical Column

#10830 sitapriyamoorthi opened 2 weeks ago
0
RFC83: Add admin call to make virtual study available for all users on their landing pages

#10829 forus opened 2 weeks ago
5
:tada: Fix Spring Security Tests

#10828 haynescd opened 2 weeks ago
1