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The maximum cluster size feature is a great feature! Would it be possible to add something for a minimum cluster size constraint? In particular, high resolution clustering often results in singletons,…
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Hello!!! I'm triyng to extract waveform information in my analysis and I'm using this code from the doc:
```python
model = load_model(params)
waveforms = model.get_cluster_spike_waveforms(cluster_…
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I wanted to try out https://github.com/xia2/xia2/pull/767, which as I understand it would give a plot that is analogous to XSCALE's table "CORRELATIONS BETWEEN INPUT DATA SETS AFTER CORRECTIONS". Howe…
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**Is your feature request related to a problem? Please describe.**
I am currently working with a dataset consisting of 20,000 sequences, and I need to perform distance-based clustering on these seq…
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Defence scenarios for the below scenarios
- Sensitive keys in code bases
- DIND(docker-in-docker) exploitation
- SSRF in K8S world
- Container escape to access host system
- Docker CIS Benchma…
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Thanks for sharing your dataset and code. I encounter some problems while running your analysis pipeline. Using the same random seed and code, I got 35 clusters after the whole "recursive Louvain clus…
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Hi MolProbity team!
I am interested in running some of the command line tools you provide and in particular "oneline-analysis" in an HPC cluster. To do so I need a docker image that I can convert to…
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In the human analysis, I tried to cluster peptides based on characteristics (aliphatic index, length, etc.). While things like PCA explain a lot of the variance, the peptides all form a big blob no ma…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Describe your proposed enhancement in detail.
As I use these days mostly (if not only) surface analysis of fMR…
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Hi,
I’m working with scRNA-seq data where three samples are pooled together and we have 20 pools. I used souporcell for demultiplexing without initial whole-genome sequencing SNP data (as it wasn’t…