-
-
```
=== prop_check_commutes from test/Icicle/Test/Avalanche/CheckCommutes.hs:27 ===
*** Failed! Falsifiable (after 69 tests):
MapT (OptionT (SumT IntT TimeT)) (OptionT StringT)
Program {inputType…
-
Possible pathogens to look at, roughly sorted in order of preference / data availability:
- ~~HIV (Trevor)~~
- ~~pneumo (Sarah)~~
- ~~dengue (Trevor)~~
- ~~malaria (Sarah)~~
- ~~enterovirus 71, includ…
trvrb updated
8 years ago
-
The general vision would be to have a number of different _modules_ (or some other name if you'd prefer) that can be applied to decorate the current data structure. For example, the `frequencies` modu…
trvrb updated
8 years ago
-
-
Some affiliations are repeated many times in the output. For example...
mlg2007 FALSE_POSITIVE 0 0 Monica L Guzman 9049396 Molecular epidemiology of dengue-1 and dengue-4 viruses. The Jou…
-
PMID:22406746; Expression of dominant negative HIPK2 inhibits HIV-1-induced apoptosis.
PMID:12145207; CDK1/CDK2 inhibitor roscovitine inhibits syncitial apoptosis induced by HIV-1 infection.
PMID:2119…
-
So I'm testing your pipeline on some new stuff. I got it to run successfully with Chik a full genome virus like Dengue. I am trying to run it against another segmented virus and it failed:
my command…
-
Check to see the list of tests required for this study and how they are required
Produce a list of tests not currently included with fields we need to required
This is currently blocked by lack of ac…
-
It's useful to have ORF finders, especially for viruses like dengue and HCV which are encoded by a single polyprotein. Could you add the following wrappers:
From the Galaxy toolshed:
[get_orfs_or_cds…