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Hi,
I am a new user of DIA-NN.
I setup a first DIA-NN run using a DB of ~70k entries and 19 samples and it took less than 1 day to finish.
Now, I am using the same settings (see attached pic), but …
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Hi Vadim,
I generated a library for **phosphoproteomics** data analysis using DIA-NN 1.9. However, I’m not sure whether I should do some preprocessing before using the generated `report-lib.tsv` in a…
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DIA-NN seems to be stopping and exiting after running for a few hours. I cant find the log as the GUI exits.
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I am getting the following error.
Listening on http://127.0.0.1:7770
[1] "bio"
[1] "Protein"
Reached in get_data
File type is diann
[1] "C:\\Users\\Damin\\AppData\\Local\\Temp\\Rtmp0oRxfa/a5f…
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Hii!!
So, I had a couple of times to repeat my data processing for a few runs and it was different each single time? They were the same files processed the previous time! Same fasta as well
Now,…
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Hi Vadim,
I am trying to predict a library with a given input tsv to produce a predicted.bin with the newest DIA-NN. I get the following error on Windows and Linux machines as of version 1.9.1. Ver…
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Dear developers,
I am unsure why the maximum variable modification option is not working. Do you have any suggestions? I am also not getting any results when running the software. What could be the …
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Hi,
I am using DIA-NN 1.8.1 in Windows 11 Pro with 13th Gen Intel(R) Core(TM) i7-13700 (processors 16, threads 24) for DIA analysis of 51 Thermo raw data files. First attempts were successful explo…
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Dear DIA-NN team,
Currently we are running DIA-NN with TimsTOF SCP acquired samples. We get very good signal and clean spectra. Also the calibration status of the instrument is good (below 10ppm)…
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Hello Vladim,
After a computer crash, I need to restart a large data analysis with DIA-NN. I guess that the FAQ (Can I implement incremental data processing of large-scale experiments based on DIA-…