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Hi,
I have to combine several datasets. Batch correction is used for clustering and Dimensionality reduction. But for visualization and DEG analysis I will be using normalized RNA counts (Seurat `N…
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Is it possible to perform differential expression analysis for each patient and to get the output logFC for each patient
Thanks.
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Hi - great piece of software and glad this NMF approach, now used in many papers, has finally been made into an easy to use API.
I noticed that the `multiNMF` function has a argument `nfeatures` wh…
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Importing a jar (minecraft 1.15.2) and the client mappings works fine, but exporting to source crashes unfortunately.
This is the error message:
`
java.lang.Error: java.lang.NullPointerException
…
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I just tried turning on trimming for my app, and noticed some warnings coming from DotNext.Metaprogramming:
```
/_/src/DotNext.Metaprogramming/Metaprogramming/MatchBuilder.cs(166,17): Trim…
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Correct defintion
FROM:
A differential expression analysis data transformation is a data transformation that has objective differential expression analysis and that consists of
TO:
A diff…
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We need to develop a robust and scalable data ingest/ETL (Extract, Transform, Load) pipeline to facilitate the reading of eQTL (expression Quantitative Trait Loci) data from FTP sources, indexing it i…
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During the 2024-Jul-01 language design work group meeting, Jonathan DiLorenzo was asking some questions that I believe might be effectively the same as those described below (@jonathan-dilorenzo feel …
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Many of our restrictions do not apply when there are no constants involved.
But we know constants can be constructed using constants only.
For example:
```
column - column = 0
column^(column - …
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I read the paper with great interest. I looked for it because it said that the implementation was publicly available, and I found this repository. When I actually used it, the behavior was different f…