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Addresses #529.
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Our Pipelines:
- [OME-TIFF Offsets](https://github.com/hubmapconsortium/portal-containers/tree/master/containers/ome-tiff-offsets)
- For the future (but not now for pipeline usage): https://github…
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It doesn't seem to be possible to upload composite datasets using the batch upload API.
There is a case in GTN where this would be useful: [upload of ibd+imzml file](https://github.com/galaxyproject/…
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**Describe the bug**
It is desirable to export a ROI of a imzML directly to a new imzML for separate processing without any preprocessing or peak picking. Currently, when doing direct export to imzML…
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Hi Alan,
I'm trying to perform a clustering over my imzML images and then save the cluster of interest in a new imzML file but when I try to do it by using Datacube reduction (Process Separately opti…
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Hi Alan,
I get the following warning sometimes:
Warning: Objects of com/alanmrace/JSpectralAnalysis/RegionOfInterest class exist - not clearing java
> In javaclasspath>local_javapath (line 195…
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**Is your feature request related to a problem? Please describe.**
Currently when a datacube from a single ROI is exported only pixels from this ROI are included in the new image
When multiple ROIs …
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https://metaspace2020.eu/annotations?db=NPA-2019-08&ds=2019-11-18_12h37m23s
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* Ensure Google Analytics is tracking enough that we can find out which parts of the site are being used or neglected
* Expand the Help page into more of a knowledge base, adding information from the…
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Hello,
Adam asked me to reach out and post the issue I've been having when attempting to use your package.
I was recently attempting to utilize SpectralAnalysis for data I had obtained from an i…