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Hello, I am trying to run a program called Omics Integrator 2. This program requires interactome data, which is stored as pointers in github. I didn't see how I get the files from github using oid in …
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Please comment on the inclusion of the following terms in omics inclusion comparison:
**\*omic(s) matches**
| term | count |
|:--------------------|-------:|
| genomics …
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Pby1 has un until now been annotated as a "
"tubulin-tyrosine ligase"
However, this new paper brings all of the previous annotation into question:
Nucleic Acids Res. 2020 Jun 19; 48(11): 6353–6…
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Before we start updating DRAO, we need to update the member ontologies and ensure there are no resulting conflicts. This ticket covers that update.
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Lines 66-68 in `Methods/main.py` has `shutil.copy()` functions. Instead of copying files, make symbolic links.
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While running HybridLinker I am getting this error:
```
running all methods on ('../Interactomes/PathLinker_2018_human-ppi-weighted-cap0_75.txt', '../Pathways/Wnt-nodes.txt', '../Pathways/Wnt-edge…
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When testing BowTieBuilder I'm getting the following error - looks like a config file is not committed?
```
Traceback (most recent call last):
File "/Library/Frameworks/Python.framework/Version…
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I just came across this project today, and it seems super useful! After getting everything installed (I'll try to open a PR to the docs later for how I got system dependencies added on macOS...), the …
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ResponseNet is outputting files of the form
```
\Problem name:
Minimize
OBJROW: 0.50705 f_Q8TBF5_Q9UKB1 + 0.50705 f_Q9UKB1_Q8TBF5 + 0.50705 f_Q9UKB1_Q13112 + 0.50705 f_Q9UKB1_Q96N67 + 0.50705…
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Would be great if we can annotate this list:
```
PXD004732 -- ProteomeTools -- 104608
PXD000561 -- A draft map of the human proteome -- 97948
PXD002815 -- A human interactome in three quantitat…