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editor preferred term: small RNA-seq
alternate terms:
textual definition: An assay in which sequencing technology is used to investigate small RNA (17-35 bp) sequences.
definition source for the t…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/armanshahrisa/cbaf
Confirm the following by editi…
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Most miRNA can be written with `g(HGNC:YFG) transcribedTo m(HGNC:YFG)` so the inference of the central dogma should also make these edges.
I'm also curious about miRNA's themselves, since there's …
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What are miRNAs?
What are two methods to identify miRNAs in sequence data?
sr320 updated
7 years ago
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Hi,
This is Nick Stover from the Tetrahymena Genome DB again. We
need to request one more set of terms for an active area of ciliate
research.
A process related to RNA interference (RNAi) is used…
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Hi,
I'm currently curating a set of papers on miRNAs, and
would like to tweak a couple of definitions for
existing terms, aswell as adding a couple of new terms.
I know there's been some recent SF e…
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Hi,I'm using stringtie to quantify reference transcripts expression with annotation file(UCSC GTF).However,only ~26000 reference transcripts were output(total 99900).I guess,it may be the influence of…
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It is a crosslinking method that uses UV light to cross-link RNA to Proteins without the incorporation of photoactivatable groups into RNA, followed by sequencing of the linked RNA.
References
Sander …
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Hello,
Please, can you help me with creating the following new terms (if appropriate):
1. A2RE (HNRNPA2B1 response element) binding as a child of GO:0003730; sequence:GCCAAGGAGCC; located at 3' UTR; …
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It is a crosslinking method that uses UV light to cross-link RNA to Proteins without the incorporation of photoactivatable groups into RNA, followed by sequencing of the linked RNA.
References
Sander …