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Hi @vgauthier, @vtraag,
I noticed this package seemed to have disappeared from conda:
```
conda search louvain --channel conda-forge
Loading channels: done
No match found for: louvain. S…
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Can we please have distinct version numbers for development versions? For example, the current `main` branch could show `0.10.4.bignumber` where `bignumber` is something derived from the present git c…
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"scanpy-scripts" is currently having dependency problems. This:
`johnnydep --output-format pinned scanpy-scripts
`
fails in a manner which might not be what you intended. In any case, it did…
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**Describe the bug**
When I fed my graph data into the cdlib.algorithms.leiden() method on a 400k node graph with 600k edges, the algorithm operated correctly and identified communities in the graph.…
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Hello!
I am trying to run Lung12 tutorial using
Giotto v. 3.3.0
R version 4.2.3
CentOS 7
Giotto installation goes OK, and Giotto environment is created without error,
but on createGiottoCosMxO…
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Hello-
Thanks for your work and effort on GIotto, I really like using this package but the installation of the python environment modules is super finicky and not that user-friendly. I am trying to…
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Rosemary's written an implementation in C, so it should just be matter of writing the hooks from this code into Python as a shared library.
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ForceAtlas2 by[ Jacomy et al.](http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098679) is a promising alternative to Fruchterman-Rheingold graph layout. There are already implementat…
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### Please make sure these conditions are met
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the latest version of scanpy.
- [X] (option…