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There is a bug in `relion_particle_subtract` when the optional particle star file supplied with the `--data` option contains particles from fewer micrographs than the `run_model.star` referenced from …
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even for no new feature support `CTFFIIND4` -> `CTFFIND5` is not a drop in replacement: it needs an extra `no` in the script that RELION writes.
I'm sure RELION team have plans to support the new …
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Example command:
`csparc2star.py 0_exposures_accepted.cs J198_passthrough_exposures_accepted.cs out.star`
Example output:
Is this expected? For use in relion, it would be useful to have t…
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I encountered several frustraiting issues when attempting 3D classification of subtomograms in Relion-5.0
1) when subtomograms are created in old style (i.e. with "2D stacks" option set to **"NO"**…
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Dear Daniel,
I am trying to transform a star file (from a single particle project, Relion 5.0) to superpose subparticles based on Chimera transformation matrix. I used both star.py and subparticle…
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Dear Relion developers,
Hi, my name is Dimitrios Bellos and I am a member of the AI & I team in the Rosalind Franklin Institute. Our team help with supporting our Franklin RELION users with issues.…
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I managed get it running after some trial and error, however even though the script shows the correct gain reference when I open relion in the directory and check the motioncor job there is no Gain-re…
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I tried the following Relion ver. 5.0 (β) tutorial on SPA for β-galactosidase, from `Preprocessing` to `DynaMight: exploring motions`.
https://relion.readthedocs.io/en/release-5.0/SPA_tutorial/index…
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**DynaMight flexibility run issue**
I have recently installed relion5 on our computing clusters. The 3D classification job and auto refinement job with Blush regularization can run successfully. Ho…
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I am trying the DynaMight job implemented in Relion 5 on a symmetric dataset and I am running into an error that does not give much explanations to try to solve by myself. Is there any way to continue…