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When this issue was opened, 151 active ontologies in the OBO Foundry did not have a `publications:` entry in their metadata. This field is used to generate the citation information on the ontology pag…
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Dear team,
I'm not entirely sure if this is the right place to ask. Please point me to the right place/persons if it isn't.
My group and I want to exploit/integrate many features and data from…
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Hi @zhilizheng
So I did sensitivity analyses on my polygenic scores with pTDT and a couple of key ones do not show overtransmission among probands. Any idea why this could happen? Thanks.
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Hi again,
I am facing a follow-up problem to a previous issue (https://github.com/amarquand/PCNtoolkit/issues/114) with regard to the warping process. As noted there, I have amended my code as reco…
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I got this error when running:
gemma -bfile merge -k merge_matrix.cXX.txt -lmm 1 -n 2 -c Q.txt -o EarWT
GSL ERROR: function value is not finite in newton.c at line 88 errno 9
However, it works …
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Hi there,
I'm new to both WDL and Cromwell and am trying to get an analysis pipeline up and running. I'm using call-caching to speed up my development, so that I don't have to repeat multi-hour ste…
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Hi,
I am following your tutorial code to use the DBSLMM.
```
dbslmm=/your/path/DBSLMM/software/dbslmm
```
I had some trouble using it. If I used this one, I will get an error:
``` "/your/path/…
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Hi
I have question concerning the ncpus option:
Whenever I start my R-script (on a multi core) machine,
it seems, that there is never more than 1 cpu utilized,
The load is always around 1 with o…
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Hi Xihao,
Thanks for helping me out earlier. I had a couple questions/issues when running "Step 1: Fit STAAR null model":
1. If I try running `STAARpipeline_Null_Model.r`, I get an error:
``…
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Genegraph has supplemented the following proband fields to Proband Evidence that need to be added to the UI:
ageType
ageUnit
ageValue
alleleOrigin
ethnicity
phenotypes
phenotypeFreeTest
previousTestin…