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Dear Zebulun,
I am trying to learn how to use fagin with the yeast dataset. However, after download the data, running ```make run-yeast``` resulted in error message. Is there a vignette for running t…
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Wines are pretty easy to make once you have the brewers/wine yeast. To make the brewers yeast Id just use the same recipe as the beer, (malt extract=barley grains and water (combine grain, water and…
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Scikit-learn does not currently support multilabel (or multioutput multiclass) targets in its classifiers, where the labels/classes are represented as strings. `fetch_openml` currently returns string-…
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Robel can you tell what the different values are for the below two fields and how can they be used for various datasets, in integration status in the dataset-masterlist.json?
"integration_status"…
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I'm not sure yeast actually poop, even though there's a book called [Everybody Poops](http://www.amazon.com/Everyone-Turtleback-School-Library-Binding/dp/0613685725/ref=sr_1_1?s=books&ie=UTF8&qid=1380…
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Issue linked to #76 and testing the `riboviz.tools.upgrade_config_file` tool from riboviz 2.1.
I used the command `python -m riboviz.tools.upgrade_config_file -i ../example-datasets/fungi/saccharom…
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Hi, I'm trying to run the code in python, but a warning arrises showing that "Could not found reaction xxxx in the coupling directory" , this message repeats for all reactions. Could you tell me on wh…
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# Version 1
## Stage 1
50g Wheat Flour
15g Yeast
30g Orange Juice
10g Vanilla Sugar
## Stage 2
90g Wheat Flour
30g White Sugar
5g Yeast
1 Egg
1 Yolk
30g Butter
Lemon zest
## Stage 3
…
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Good afternoon,
Thanks for developing this tool. I am trying to analyze a 96-well plate of yeasts grown on congo red agar and I am getting misleading results. I get highly underestimated growth /…
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I had thought that read counts returned reads only on CDS, not on the entire transcript. But I've checked on a yeast dataset and found that we are counting on the whole transcript and there are reads …