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https://mp.weixin.qq.com/s/OoyjOl0txT8s84Q9NbzQlg
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I am very interested in your project .But how to train the 'circRNA2Vec_model' by myself? Can you provide the corresponding code ？Thank you! I'm looking forward for your reply .
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Hi!
I followed the instructions to download all resources as the example you provided in the README (using mm10 instead of hg38):
`~/COMPSRA$ java -jar COMPSRA.jar -tk -dr -ck miRNA_hg38,piRNA_…
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# 生信爱好者周刊（第 141 期）：
这里记录每周值得分享的生信相关内容，周日发布。
本杂志开源（GitHub: [openbiox/weekly](https://github.com/openbiox/weekly)），欢迎提交 issue，投稿或推荐生信相关内容。
[「生信周刊讨论区」](https://github.com/openbiox/weekly/discuss…
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### Description of the bug
Hello,
I am trying to run nf-core/circRNA on sncRNA samples, and I encountered an error during the annotation part for some of the samples. I noticed that the samples wi…
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Hi @mtokuyama I didn't detect any ERVmap.
I used docker https://hub.docker.com/r/eipm/ervmap
````
singularity exec \
--bind ${dir}/raw:/data:ro \
--bind ${index}:/genome:ro \
--bind…
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I've been hitting this error, wondering if this is a bug with Ciri?
```
Building DAG of jobs...
Using shell: /usr/bin/bash
Provided cores: 64
Rules claiming more threads will be scaled down.
S…
byee4 updated
2 months ago
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(env_nf) [nf_core]$ nextflow run nf-core-circrna_dev/dev --input samplecircrna.csv --phenotype samplecircrna_condition.csv --outdir testout
N E X T F L O W ~ version 23.10.1
Launching `nf-core-ci…
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### Description of the bug
Hello!
I am trying to solve the following error, but I am not able to use the parameter `--limitSjdbInsertNsj` to resolve it.
Thank you very much for your time and …
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I assume this is some kind of latency issue, but just in case you've hit the same issue and it's a reproducible one. I'll close it if I can re-trying fixes things.
```
Error in rule ciri_run_ciri_…
byee4 updated
2 months ago