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Please use the thread to arrive at
1) Common names of covariates used in MPlus model estimation.
2) Rules for centering of the covariates
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@annierobi and @GracielaMuniz , i'm drawing your attention to the fact that in the current state the models from ELSA don't conform to the typical structure of the covariates. To illustrate, consider…
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I'm not sure what the best solution is, but ResponseCurve currently defaults to printing each plot in turn, too quickly to be seen.
Perhaps an option to save all the figures somewhere. Or a pause unt…
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Bioblim module currently crops to terrestrial land.
There should be either a marineBioclim module or a switch in `Bioclim` to switch this.
Both terrestrial and marine is potentially an appropriate e…
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I was wondering if it is possible to add exogenous variables as extra features to use in the model. Cheers
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**Describe the bug**
An error is shown (`Error: No method asJSON S3 class: call`) when saving PLP data that uses cohort covariates. The problems occurs a step earlier during `getPlpData()`.
**Ad…
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I think a basic functionality that the package should have built in is basic imputation. Imputing based on `mean`, `median` or some other simply calculated single value. This would primarily be useful…
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In `correlate_covariates.R` on [line 52](https://github.com/bioFAM/MOFA2/blob/master/R/correlate_covariates.R#L52) the code converts the columns to numeric twice with a warning in between. Line 56 is …
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Adapted from comments from René:
- [x] The input fields need some checking/validating of “acceptable” values
- [ ] The results should be given with confidence intervals (default to 95%, but it sho…
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I have 20K samples, and 150K variants. If we don't have limits on memory and number threads, what are the suggested flags to use to improve the speed. I am running below, it is taking too long (2hours…