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>[HOMER]( http://homer.ucsd.edu/homer/)(Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and next-gen sequencing analysis. It is a collection of command line p…
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Meeting note on Feb 26. 2021
1. DNA footprinting pipeline(shared by Shannon): http://www.regulatory-genomics.org/hint/introduction/
2. DNA footprinting paper (shared by Shannon): https://genomebiolo…
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https://mp.weixin.qq.com/s/67XcexbMJnIy6-GyI8OwzQ
ixxmu updated
2 years ago
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https://mp.weixin.qq.com/s/ihchBTTxFuOX9LTtQpPwgg
ixxmu updated
2 years ago
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# 生信爱好者周刊（第 4 期）：生信有一天可以得诺贝尔奖吗
这里记录每周值得分享的生信相关内容，周日发布。
本杂志开源（GitHub: [ShixiangWang/weekly](https://github.com/ShixiangWang/weekly)），欢迎提交 issue，投稿或推荐生信相关内容。
GitHub 粉们可以通过 Watch 仓库的 Release（提前）…
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Hello,
I am trying to use computeMatrix and plotHeatmapper to generate heatmaps from some ChIPseq data. I have my bigWigs and feature maps, and yesterday I was able to generate the .gz matrix file…
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Hi,
I have downloaded the avg.bigwig file to use it to derive the 6th channel as input for training my model. I have quantile normalised my other Dnase-seq input data for the samples, is it necessa…
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https://mp.weixin.qq.com/s/B-yGJCkApqbH1ZV0IDvU_A
ixxmu updated
2 years ago
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https://www.jianshu.com/p/42b0ffd65eb0
ixxmu updated
2 years ago
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Hi,
I have ran SEMpl for IKZF1 in GM12878 twice, using different ChIP-seq data as I am unsure of the recommended bigwig output to use.
Firstly, using the signal p-value bigwig file (ENCFF176OVL …